RNA–Protein interactions for RNA: ENST00000285419.7

TMEM55A-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM55A, Length 2,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-201ENST00000285419 NSD2O96028 1365 aa13.25□□□□□ -0.29
TMEM55A-201ENST00000285419 PDE1AP54750 535 aa13.24□□□□□ -0.29
TMEM55A-201ENST00000285419 CTNNA3Q9UI47 895 aa13.24□□□□□ -0.29
TMEM55A-201ENST00000285419 EXOC6BQ9Y2D4 811 aa13.24□□□□□ -0.29
TMEM55A-201ENST00000285419 DIP2CQ9Y2E4 1556 aa13.24□□□□□ -0.29
TMEM55A-201ENST00000285419 INTS4Q96HW7 963 aaKnown RBP13.24□□□□□ -0.29
TMEM55A-201ENST00000285419 ESYT1Q9BSJ8 1104 aa13.24□□□□□ -0.29
TMEM55A-201ENST00000285419 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.24□□□□□ -0.29
TMEM55A-201ENST00000285419 V9GYY5 206 aaPredicted RBP13.24□□□□□ -0.29
TMEM55A-201ENST00000285419 FAM69CQ0P6D2 419 aa13.23□□□□□ -0.29
TMEM55A-201ENST00000285419 RPAP2Q8IXW5 612 aaPredicted RBP13.23□□□□□ -0.29
TMEM55A-201ENST00000285419 KIAA1210Q9ULL0 1709 aa13.23□□□□□ -0.29
TMEM55A-201ENST00000285419 TAF3Q5VWG9 929 aa13.23□□□□□ -0.29
TMEM55A-201ENST00000285419 SLC4A10Q6U841 1118 aa13.23□□□□□ -0.29
TMEM55A-201ENST00000285419 MYOM2P54296 1465 aa13.23□□□□□ -0.29
TMEM55A-201ENST00000285419 TCHHQ07283 1943 aa13.23□□□□□ -0.29
TMEM55A-201ENST00000285419 GOLGA6L6A8MZA4 724 aa13.23□□□□□ -0.29
TMEM55A-201ENST00000285419 CCDC186Q7Z3E2 898 aa13.23□□□□□ -0.29
TMEM55A-201ENST00000285419 TRERF1Q96PN7 1200 aa13.23□□□□□ -0.29
TMEM55A-201ENST00000285419 NRBP1Q9UHY1 535 aa13.23□□□□□ -0.29
TMEM55A-201ENST00000285419 MINK1Q8N4C8 1332 aaPredicted RBP13.23□□□□□ -0.29
TMEM55A-201ENST00000285419 SLFN14P0C7P3 912 aa13.22□□□□□ -0.29
TMEM55A-201ENST00000285419 TNNT1P13805 278 aa13.22□□□□□ -0.29
TMEM55A-201ENST00000285419 UBE2HP62256 183 aa13.22□□□□□ -0.29
TMEM55A-201ENST00000285419 CAMK4Q16566 473 aa13.22□□□□□ -0.29
TMEM55A-201ENST00000285419 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.22□□□□□ -0.29
TMEM55A-201ENST00000285419 IRX5P78411 483 aaPredicted RBP13.21□□□□□ -0.29
TMEM55A-201ENST00000285419 GGT6Q6P531 493 aa13.21□□□□□ -0.29
TMEM55A-201ENST00000285419 LUZP1Q86V48 1076 aa13.21□□□□□ -0.29
TMEM55A-201ENST00000285419 COL3A1P02461 1466 aaPredicted RBP13.21□□□□□ -0.3
TMEM55A-201ENST00000285419 NPHP1O15259 732 aa13.2□□□□□ -0.3
TMEM55A-201ENST00000285419 ZSCAN22P10073 491 aaPredicted RBP13.2□□□□□ -0.3
TMEM55A-201ENST00000285419 DNM1Q05193 864 aaKnown RBP13.2□□□□□ -0.3
TMEM55A-201ENST00000285419 KIF1BO60333 1816 aa13.2□□□□□ -0.3
TMEM55A-201ENST00000285419 ABCC3O15438 1527 aa13.2□□□□□ -0.3
TMEM55A-201ENST00000285419 SYT1P21579 422 aa13.2□□□□□ -0.3
TMEM55A-201ENST00000285419 CCDC112Q8NEF3 446 aa13.2□□□□□ -0.3
TMEM55A-201ENST00000285419 DDX41Q9UJV9 622 aaKnown RBP13.2□□□□□ -0.3
TMEM55A-201ENST00000285419 QRICH2Q9H0J4 1663 aa13.2□□□□□ -0.3
TMEM55A-201ENST00000285419 MSH6P52701 1360 aa13.2□□□□□ -0.3
TMEM55A-201ENST00000285419 TERF2IPQ9NYB0 399 aa13.2□□□□□ -0.3
TMEM55A-201ENST00000285419 NPATQ14207 1427 aa13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 ATP10DQ9P241 1426 aa13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 STX6O43752 255 aa13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 MAP4K4O95819 1239 aaPredicted RBP13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 GABPB1Q06547 395 aaPredicted RBP13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 TPD52L1Q16890 204 aaPredicted RBP13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 FUCA2Q9BTY2 467 aa13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 IL25Q9H293 177 aa13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 KNDC1Q76NI1 1749 aa13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 F6X3S4 739 aa13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 CHMLP26374 656 aa13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 UNC5CLQ8IV45 518 aa13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 CKAP2LQ8IYA6 745 aa13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 ST7Q9NRC1 585 aa13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 RTL1A6NKG5 1358 aa13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 RPAP1Q9BWH6 1393 aaPredicted RBP13.19□□□□□ -0.3
TMEM55A-201ENST00000285419 TPM3P06753 285 aa13.18□□□□□ -0.3
TMEM55A-201ENST00000285419 CPA1P15085 419 aa13.18□□□□□ -0.3
TMEM55A-201ENST00000285419 TERF2Q15554 542 aa13.18□□□□□ -0.3
TMEM55A-201ENST00000285419 EMILIN1Q9Y6C2 1016 aa13.18□□□□□ -0.3
TMEM55A-201ENST00000285419 SMTNL1A8MU46 457 aa13.18□□□□□ -0.3
TMEM55A-201ENST00000285419 ZNF853P0CG23 659 aa13.18□□□□□ -0.3
TMEM55A-201ENST00000285419 CCDC192P0DO97 292 aa13.18□□□□□ -0.3
TMEM55A-201ENST00000285419 KIF18AQ8NI77 898 aa13.18□□□□□ -0.3
TMEM55A-201ENST00000285419 TRIM5Q9C035 493 aa13.18□□□□□ -0.3
TMEM55A-201ENST00000285419 POLKQ9UBT6 870 aa13.18□□□□□ -0.3
TMEM55A-201ENST00000285419 REREQ9P2R6 1566 aa13.18□□□□□ -0.3
TMEM55A-201ENST00000285419 YEATS2Q9ULM3 1422 aa13.18□□□□□ -0.3
TMEM55A-201ENST00000285419 VPS37CA5D8V6 355 aaPredicted RBP13.17□□□□□ -0.3
TMEM55A-201ENST00000285419 HMMRO75330 724 aa13.17□□□□□ -0.3
TMEM55A-201ENST00000285419 F13A1P00488 732 aa13.17□□□□□ -0.3
TMEM55A-201ENST00000285419 TMEM87AQ8NBN3 555 aa13.17□□□□□ -0.3
TMEM55A-201ENST00000285419 RTF1Q92541 710 aaKnown RBP13.17□□□□□ -0.3
TMEM55A-201ENST00000285419 CABP1Q9NZU7 370 aa13.17□□□□□ -0.3
TMEM55A-201ENST00000285419 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
TMEM55A-201ENST00000285419 CAMSAP1Q5T5Y3 1602 aa13.17□□□□□ -0.3
TMEM55A-201ENST00000285419 MYO3AQ8NEV4 1616 aa13.17□□□□□ -0.3
TMEM55A-201ENST00000285419 LRRC7Q96NW7 1537 aa13.17□□□□□ -0.3
TMEM55A-201ENST00000285419 CFAP65Q6ZU64 1925 aaKnown RBP13.17□□□□□ -0.3
TMEM55A-201ENST00000285419 ZC3H13Q5T200 1668 aaKnown RBP13.16□□□□□ -0.3
TMEM55A-201ENST00000285419 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.16□□□□□ -0.3
TMEM55A-201ENST00000285419 TULP4Q9NRJ4 1543 aa13.16□□□□□ -0.3
TMEM55A-201ENST00000285419 FAM173BQ6P4H8 233 aa13.16□□□□□ -0.3
TMEM55A-201ENST00000285419 KRT222Q8N1A0 295 aa13.16□□□□□ -0.3
TMEM55A-201ENST00000285419 DDX54Q8TDD1 881 aaKnown RBP13.16□□□□□ -0.3
TMEM55A-201ENST00000285419 CHMP4AQ9BY43 222 aa13.16□□□□□ -0.3
TMEM55A-201ENST00000285419 MORC2Q9Y6X9 1032 aaPredicted RBP13.16□□□□□ -0.3
TMEM55A-201ENST00000285419 RGS12O14924 1447 aa13.16□□□□□ -0.3
TMEM55A-201ENST00000285419 IFT172Q9UG01 1749 aa13.16□□□□□ -0.3
TMEM55A-201ENST00000285419 ADGRB3O60242 1522 aa13.15□□□□□ -0.3
TMEM55A-201ENST00000285419 CCDC66A2RUB6 948 aa13.15□□□□□ -0.3
TMEM55A-201ENST00000285419 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
TMEM55A-201ENST00000285419 AK2P54819 239 aa13.15□□□□□ -0.3
TMEM55A-201ENST00000285419 ANAPC15P60006 121 aa13.15□□□□□ -0.3
TMEM55A-201ENST00000285419 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
TMEM55A-201ENST00000285419 HDGFL2Q7Z4V5 671 aaPredicted RBP13.15□□□□□ -0.3
TMEM55A-201ENST00000285419 IPO4Q8TEX9 1081 aaKnown RBP13.15□□□□□ -0.3
TMEM55A-201ENST00000285419 TSPOAP1O95153 1857 aa13.15□□□□□ -0.3
TMEM55A-201ENST00000285419 FAM135BQ49AJ0 1406 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms