RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 CABP4P57796 275 aa23.02■■□□□ 1.28
ATG3-201ENST00000283290 NFATC2IPQ8NCF5 419 aa23.02■■□□□ 1.28
ATG3-201ENST00000283290 TMOD3Q9NYL9 352 aa23.02■■□□□ 1.28
ATG3-201ENST00000283290 SIPA1L3O60292 1781 aaPredicted RBP23.02■■□□□ 1.27
ATG3-201ENST00000283290 APAF1O14727 1248 aa23.01■■□□□ 1.27
ATG3-201ENST00000283290 PNNQ9H307 717 aaKnown RBP23.01■■□□□ 1.27
ATG3-201ENST00000283290 PAPPAQ13219 1627 aa23.01■■□□□ 1.27
ATG3-201ENST00000283290 PSDA5PKW4 1024 aaPredicted RBP23.01■■□□□ 1.27
ATG3-201ENST00000283290 TMPOP42166 694 aaKnown RBP23.01■■□□□ 1.27
ATG3-201ENST00000283290 ASAP1Q9ULH1 1129 aa23.01■■□□□ 1.27
ATG3-201ENST00000283290 ERVV-2B6SEH9 535 aa23■■□□□ 1.27
ATG3-201ENST00000283290 RIPK4P57078 832 aa23■■□□□ 1.27
ATG3-201ENST00000283290 LRRC4BQ9NT99 713 aa23■■□□□ 1.27
ATG3-201ENST00000283290 PALLDQ8WX93 1383 aa22.99■■□□□ 1.27
ATG3-201ENST00000283290 R3HDM1Q15032 1099 aaKnown RBP22.99■■□□□ 1.27
ATG3-201ENST00000283290 ANO8Q9HCE9 1232 aaPredicted RBP22.99■■□□□ 1.27
ATG3-201ENST00000283290 SALL2Q9Y467 1007 aaPredicted RBP22.99■■□□□ 1.27
ATG3-201ENST00000283290 CCER2I3L3R5 266 aa22.98■■□□□ 1.27
ATG3-201ENST00000283290 SLC39A6Q13433 755 aa22.97■■□□□ 1.27
ATG3-201ENST00000283290 RTF1Q92541 710 aaKnown RBP22.97■■□□□ 1.27
ATG3-201ENST00000283290 SLC52A2Q9HAB3 445 aa22.97■■□□□ 1.27
ATG3-201ENST00000283290 TAF1LQ8IZX4 1826 aa22.97■■□□□ 1.27
ATG3-201ENST00000283290 NBPF14Q5TI25 921 aa22.97■■□□□ 1.27
ATG3-201ENST00000283290 MRC1P22897 1456 aa22.97■■□□□ 1.27
ATG3-201ENST00000283290 C5P01031 1676 aa22.96■■□□□ 1.27
ATG3-201ENST00000283290 SLC27A3Q5K4L6 730 aa22.96■■□□□ 1.27
ATG3-201ENST00000283290 ATG3Q9NT62 314 aa22.96■■□□□ 1.27
ATG3-201ENST00000283290 CCNL1Q9UK58 526 aaPredicted RBP22.95■■□□□ 1.26
ATG3-201ENST00000283290 CEMIPQ8WUJ3 1361 aa22.95■■□□□ 1.26
ATG3-201ENST00000283290 TEFQ10587 303 aa22.94■■□□□ 1.26
ATG3-201ENST00000283290 SMARCC1Q92922 1105 aaPredicted RBP22.94■■□□□ 1.26
ATG3-201ENST00000283290 MIS18AQ9NYP9 233 aa22.94■■□□□ 1.26
ATG3-201ENST00000283290 TRIM35Q9UPQ4 493 aa22.94■■□□□ 1.26
ATG3-201ENST00000283290 TUBGCP6Q96RT7 1819 aa22.93■■□□□ 1.26
ATG3-201ENST00000283290 KCNQ3O43525 872 aa22.92■■□□□ 1.26
ATG3-201ENST00000283290 PTCD1O75127 700 aaKnown RBP22.92■■□□□ 1.26
ATG3-201ENST00000283290 RBM42Q9BTD8 480 aaKnown RBP22.91■■□□□ 1.26
ATG3-201ENST00000283290 STK32BQ9NY57 414 aa22.91■■□□□ 1.26
ATG3-201ENST00000283290 ZNF827Q17R98 1081 aa22.9■■□□□ 1.26
ATG3-201ENST00000283290 SLC15A2Q16348 729 aa22.89■■□□□ 1.26
ATG3-201ENST00000283290 LOC102724428A0A0B4J2F2 783 aa22.89■■□□□ 1.25
ATG3-201ENST00000283290 HTATSF1O43719 755 aaKnown RBP22.89■■□□□ 1.25
ATG3-201ENST00000283290 SIK1P57059 783 aa22.89■■□□□ 1.25
ATG3-201ENST00000283290 CASZ1Q86V15 1759 aa22.88■■□□□ 1.25
ATG3-201ENST00000283290 UBR2Q8IWV8 1755 aa22.88■■□□□ 1.25
ATG3-201ENST00000283290 SLC4A9Q96Q91 983 aa22.88■■□□□ 1.25
ATG3-201ENST00000283290 C4BP0C0L5 1744 aa22.87■■□□□ 1.25
ATG3-201ENST00000283290 BTBD11A6QL63 1104 aa22.87■■□□□ 1.25
ATG3-201ENST00000283290 AKT1S1Q96B36 256 aa22.87■■□□□ 1.25
ATG3-201ENST00000283290 LAS1LQ9Y4W2 734 aaKnown RBP22.87■■□□□ 1.25
ATG3-201ENST00000283290 QSER1Q2KHR3 1735 aa22.87■■□□□ 1.25
ATG3-201ENST00000283290 ZNF831Q5JPB2 1677 aa22.87■■□□□ 1.25
ATG3-201ENST00000283290 SRCAPQ6ZRS2 3230 aa22.87■■□□□ 1.25
ATG3-201ENST00000283290 KDM3BQ7LBC6 1761 aa22.86■■□□□ 1.25
ATG3-201ENST00000283290 KCPQ6ZWJ8 1503 aa22.86■■□□□ 1.25
ATG3-201ENST00000283290 COL5A3P25940 1745 aaPredicted RBP22.85■■□□□ 1.25
ATG3-201ENST00000283290 TJP1Q07157 1748 aa22.85■■□□□ 1.25
ATG3-201ENST00000283290 ATP6V1AP38606 617 aa22.84■■□□□ 1.25
ATG3-201ENST00000283290 ITPK1Q13572 414 aa22.84■■□□□ 1.25
ATG3-201ENST00000283290 PDGFDQ9GZP0 370 aaPredicted RBP22.84■■□□□ 1.25
ATG3-201ENST00000283290 LMOD3Q0VAK6 560 aa22.84■■□□□ 1.25
ATG3-201ENST00000283290 TAF7Q15545 349 aaPredicted RBP22.83■■□□□ 1.25
ATG3-201ENST00000283290 ZNF790Q6PG37 636 aa22.83■■□□□ 1.25
ATG3-201ENST00000283290 SMIM5Q71RC9 77 aa22.83■■□□□ 1.25
ATG3-201ENST00000283290 LINC00116Q8NCU8 138 aa22.83■■□□□ 1.25
ATG3-201ENST00000283290 TTC5Q8N0Z6 440 aa22.82■■□□□ 1.24
ATG3-201ENST00000283290 ZNF496Q96IT1 587 aaPredicted RBP22.82■■□□□ 1.24
ATG3-201ENST00000283290 UBR3Q6ZT12 1888 aa22.82■■□□□ 1.24
ATG3-201ENST00000283290 CICQ96RK0 1608 aaPredicted RBP22.82■■□□□ 1.24
ATG3-201ENST00000283290 PRAMEF22A3QJZ6 481 aa22.8■■□□□ 1.24
ATG3-201ENST00000283290 TFCP2L1Q9NZI6 479 aa22.8■■□□□ 1.24
ATG3-201ENST00000283290 WWC1Q8IX03 1113 aa22.8■■□□□ 1.24
ATG3-201ENST00000283290 MYH14Q7Z406 1995 aaKnown RBP22.79■■□□□ 1.24
ATG3-201ENST00000283290 DNAJC10Q8IXB1 793 aa22.79■■□□□ 1.24
ATG3-201ENST00000283290 PNPLA7Q6ZV29 1317 aa22.79■■□□□ 1.24
ATG3-201ENST00000283290 LRP5O75197 1615 aa22.78■■□□□ 1.24
ATG3-201ENST00000283290 TSPYL4Q9UJ04 414 aa22.78■■□□□ 1.24
ATG3-201ENST00000283290 KRT24Q2M2I5 525 aa22.77■■□□□ 1.24
ATG3-201ENST00000283290 AMIGO3Q86WK7 504 aa22.76■■□□□ 1.23
ATG3-201ENST00000283290 AK7Q96M32 723 aa22.76■■□□□ 1.23
ATG3-201ENST00000283290 HEG1Q9ULI3 1381 aa22.74■■□□□ 1.23
ATG3-201ENST00000283290 ZBTB7AO95365 584 aa22.74■■□□□ 1.23
ATG3-201ENST00000283290 HMGB2P26583 209 aaKnown RBP22.74■■□□□ 1.23
ATG3-201ENST00000283290 TSR2Q969E8 191 aaKnown RBP22.74■■□□□ 1.23
ATG3-201ENST00000283290 FMNL2Q96PY5 1086 aa22.74■■□□□ 1.23
ATG3-201ENST00000283290 SPINK5Q9NQ38 1064 aaPredicted RBP22.73■■□□□ 1.23
ATG3-201ENST00000283290 MBIPQ9NS73 344 aa22.73■■□□□ 1.23
ATG3-201ENST00000283290 CHL1O00533 1208 aa22.72■■□□□ 1.23
ATG3-201ENST00000283290 GNPATO15228 680 aa22.72■■□□□ 1.23
ATG3-201ENST00000283290 PIP4K2AP48426 406 aaPredicted RBP22.72■■□□□ 1.23
ATG3-201ENST00000283290 EIF4A1P60842 406 aaKnown RBP22.72■■□□□ 1.23
ATG3-201ENST00000283290 CCDC27Q2M243 656 aa22.72■■□□□ 1.23
ATG3-201ENST00000283290 COL23A1Q86Y22 540 aaPredicted RBP22.72■■□□□ 1.23
ATG3-201ENST00000283290 PHF14O94880 888 aa22.72■■□□□ 1.23
ATG3-201ENST00000283290 USP16Q9Y5T5 823 aa22.72■■□□□ 1.23
ATG3-201ENST00000283290 CNTNAP4Q9C0A0 1308 aa22.71■■□□□ 1.23
ATG3-201ENST00000283290 MSH5O43196 834 aa22.7■■□□□ 1.22
ATG3-201ENST00000283290 ZNF853P0CG23 659 aa22.7■■□□□ 1.22
ATG3-201ENST00000283290 CRKLP46109 303 aaKnown RBP22.7■■□□□ 1.22
ATG3-201ENST00000283290 CFAP44Q96MT7 982 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms