RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 SRGAP3O43295 1099 aa17.36■□□□□ 0.37
TNFRSF11A-201ENST00000269485 FGD1P98174 961 aa17.36■□□□□ 0.37
TNFRSF11A-201ENST00000269485 PA2G4Q9UQ80 394 aaKnown RBP17.36■□□□□ 0.37
TNFRSF11A-201ENST00000269485 NFATC2IPQ8NCF5 419 aa17.36■□□□□ 0.37
TNFRSF11A-201ENST00000269485 CPSF1Q10570 1443 aaKnown RBP17.36■□□□□ 0.37
TNFRSF11A-201ENST00000269485 ZBTB40Q9NUA8 1239 aa17.35■□□□□ 0.37
TNFRSF11A-201ENST00000269485 NDUFB9Q9Y6M9 179 aa17.35■□□□□ 0.37
TNFRSF11A-201ENST00000269485 ESPNB1AK53 854 aa17.35■□□□□ 0.37
TNFRSF11A-201ENST00000269485 BBXQ8WY36 941 aaPredicted RBP17.35■□□□□ 0.37
TNFRSF11A-201ENST00000269485 CHMP4CQ96CF2 233 aa17.35■□□□□ 0.37
TNFRSF11A-201ENST00000269485 UPF3BQ9BZI7 483 aaKnown RBP17.35■□□□□ 0.37
TNFRSF11A-201ENST00000269485 LRRC7Q96NW7 1537 aa17.34■□□□□ 0.37
TNFRSF11A-201ENST00000269485 CHAMP1Q96JM3 812 aa17.33■□□□□ 0.37
TNFRSF11A-201ENST00000269485 STK11IPQ8N1F8 1099 aa17.33■□□□□ 0.36
TNFRSF11A-201ENST00000269485 TTC21AQ8NDW8 1320 aa17.33■□□□□ 0.36
TNFRSF11A-201ENST00000269485 PLCB2Q00722 1185 aa17.33■□□□□ 0.36
TNFRSF11A-201ENST00000269485 DNAJC5Q9H3Z4 198 aa17.33■□□□□ 0.36
TNFRSF11A-201ENST00000269485 R3HCC1Q9Y3T6 440 aaKnown RBP17.33■□□□□ 0.36
TNFRSF11A-201ENST00000269485 ZBTB7BO15156 539 aaPredicted RBP17.32■□□□□ 0.36
TNFRSF11A-201ENST00000269485 CCDC30Q5VVM6 783 aa17.32■□□□□ 0.36
TNFRSF11A-201ENST00000269485 MAP2P11137 1827 aaKnown RBP17.32■□□□□ 0.36
TNFRSF11A-201ENST00000269485 CLCN1P35523 988 aa17.32■□□□□ 0.36
TNFRSF11A-201ENST00000269485 CHMP4BQ9H444 224 aaKnown RBP17.32■□□□□ 0.36
TNFRSF11A-201ENST00000269485 FAM135BQ49AJ0 1406 aa17.31■□□□□ 0.36
TNFRSF11A-201ENST00000269485 PLCD3Q8N3E9 789 aa17.31■□□□□ 0.36
TNFRSF11A-201ENST00000269485 NEUROD6Q96NK8 337 aa17.31■□□□□ 0.36
TNFRSF11A-201ENST00000269485 ZBTB3Q9H5J0 574 aa17.31■□□□□ 0.36
TNFRSF11A-201ENST00000269485 C19orf44Q9H6X5 657 aa17.31■□□□□ 0.36
TNFRSF11A-201ENST00000269485 ALDH1L2Q3SY69 923 aa17.31■□□□□ 0.36
TNFRSF11A-201ENST00000269485 PNPLA6Q8IY17 1366 aa17.31■□□□□ 0.36
TNFRSF11A-201ENST00000269485 CHL1O00533 1208 aa17.3■□□□□ 0.36
TNFRSF11A-201ENST00000269485 NPHP1O15259 732 aa17.3■□□□□ 0.36
TNFRSF11A-201ENST00000269485 HMMRO75330 724 aa17.3■□□□□ 0.36
TNFRSF11A-201ENST00000269485 MSNP26038 577 aaKnown RBP17.3■□□□□ 0.36
TNFRSF11A-201ENST00000269485 PLEKHO1Q53GL0 409 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF11A-201ENST00000269485 TBC1D2Q9BYX2 928 aa17.3■□□□□ 0.36
TNFRSF11A-201ENST00000269485 CCDC8Q9H0W5 538 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF11A-201ENST00000269485 IL16Q14005 1332 aa17.3■□□□□ 0.36
TNFRSF11A-201ENST00000269485 CASC1Q6TDU7 716 aa17.3■□□□□ 0.36
TNFRSF11A-201ENST00000269485 PROSER3Q2NL68 480 aa17.29■□□□□ 0.36
TNFRSF11A-201ENST00000269485 MPNDQ8N594 471 aa17.29■□□□□ 0.36
TNFRSF11A-201ENST00000269485 PNMA6EA0A0J9YXQ4 647 aa17.29■□□□□ 0.36
TNFRSF11A-201ENST00000269485 SIRT1Q96EB6 747 aa17.29■□□□□ 0.36
TNFRSF11A-201ENST00000269485 TMEM94Q12767 1356 aa17.29■□□□□ 0.36
TNFRSF11A-201ENST00000269485 VGLL3A8MV65 326 aa17.28■□□□□ 0.36
TNFRSF11A-201ENST00000269485 GNAI2P04899 355 aa17.28■□□□□ 0.36
TNFRSF11A-201ENST00000269485 CDK11BP21127 795 aaKnown RBP17.28■□□□□ 0.36
TNFRSF11A-201ENST00000269485 ZNF335Q9H4Z2 1342 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF11A-201ENST00000269485 SBNO1A3KN83 1393 aa17.28■□□□□ 0.36
TNFRSF11A-201ENST00000269485 CT47B1P0C2W7 299 aaPredicted RBP17.28■□□□□ 0.36
TNFRSF11A-201ENST00000269485 IP6K1Q92551 441 aa17.28■□□□□ 0.36
TNFRSF11A-201ENST00000269485 ERBB4Q15303 1308 aa17.27■□□□□ 0.36
TNFRSF11A-201ENST00000269485 NBPF7P0C2Y1 421 aaPredicted RBP17.27■□□□□ 0.36
TNFRSF11A-201ENST00000269485 KCNQ4P56696 695 aa17.27■□□□□ 0.36
TNFRSF11A-201ENST00000269485 TBC1D9Q6ZT07 1266 aa17.27■□□□□ 0.36
TNFRSF11A-201ENST00000269485 SIRT2Q8IXJ6 389 aa17.27■□□□□ 0.36
TNFRSF11A-201ENST00000269485 TCEANC2Q96MN5 208 aa17.27■□□□□ 0.36
TNFRSF11A-201ENST00000269485 KCNH5Q8NCM2 988 aa17.27■□□□□ 0.35
TNFRSF11A-201ENST00000269485 GPTP24298 496 aa17.27■□□□□ 0.35
TNFRSF11A-201ENST00000269485 CABP4P57796 275 aa17.27■□□□□ 0.35
TNFRSF11A-201ENST00000269485 FAM182BQ5T319 152 aa17.27■□□□□ 0.35
TNFRSF11A-201ENST00000269485 ACSBG1Q96GR2 724 aa17.27■□□□□ 0.35
TNFRSF11A-201ENST00000269485 SRCIN1Q9C0H9 1055 aa17.27■□□□□ 0.35
TNFRSF11A-201ENST00000269485 CWC27Q6UX04 472 aaKnown RBP17.26■□□□□ 0.35
TNFRSF11A-201ENST00000269485 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
TNFRSF11A-201ENST00000269485 MSH6P52701 1360 aa17.26■□□□□ 0.35
TNFRSF11A-201ENST00000269485 TATP17735 454 aaPredicted RBP17.26■□□□□ 0.35
TNFRSF11A-201ENST00000269485 DNTTIP2Q5QJE6 756 aaKnown RBP17.26■□□□□ 0.35
TNFRSF11A-201ENST00000269485 MYD88Q99836 296 aa17.25■□□□□ 0.35
TNFRSF11A-201ENST00000269485 PDCL3Q9H2J4 239 aa17.25■□□□□ 0.35
TNFRSF11A-201ENST00000269485 DNAJC2Q99543 621 aaKnown RBP17.25■□□□□ 0.35
TNFRSF11A-201ENST00000269485 SPG7Q9UQ90 795 aa17.25■□□□□ 0.35
TNFRSF11A-201ENST00000269485 IQSEC2Q5JU85 1478 aa17.25■□□□□ 0.35
TNFRSF11A-201ENST00000269485 PPP1R42Q7Z4L9 355 aa17.25■□□□□ 0.35
TNFRSF11A-201ENST00000269485 USP19O94966 1318 aa17.25■□□□□ 0.35
TNFRSF11A-201ENST00000269485 TRAK2O60296 914 aa17.24■□□□□ 0.35
TNFRSF11A-201ENST00000269485 NEK4P51957 841 aa17.24■□□□□ 0.35
TNFRSF11A-201ENST00000269485 ZNF853P0CG23 659 aa17.24■□□□□ 0.35
TNFRSF11A-201ENST00000269485 IGSF3O75054 1194 aa17.24■□□□□ 0.35
TNFRSF11A-201ENST00000269485 RIMS1Q86UR5 1692 aaKnown RBP17.23■□□□□ 0.35
TNFRSF11A-201ENST00000269485 NEURL4Q96JN8 1562 aa17.23■□□□□ 0.35
TNFRSF11A-201ENST00000269485 AATKQ6ZMQ8 1374 aa17.23■□□□□ 0.35
TNFRSF11A-201ENST00000269485 NPHP4O75161 1426 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF11A-201ENST00000269485 CPA1P15085 419 aa17.23■□□□□ 0.35
TNFRSF11A-201ENST00000269485 COL3A1P02461 1466 aaPredicted RBP17.23■□□□□ 0.35
TNFRSF11A-201ENST00000269485 TAF7LQ5H9L4 462 aa17.23■□□□□ 0.35
TNFRSF11A-201ENST00000269485 BOLA2Q9H3K6 86 aa17.22■□□□□ 0.35
TNFRSF11A-201ENST00000269485 SHPRHQ149N8 1683 aa17.22■□□□□ 0.35
TNFRSF11A-201ENST00000269485 IFIT2P09913 472 aaKnown RBP17.22■□□□□ 0.35
TNFRSF11A-201ENST00000269485 GORABQ5T7V8 394 aa17.22■□□□□ 0.35
TNFRSF11A-201ENST00000269485 BICDL1Q6ZP65 573 aa17.21■□□□□ 0.35
TNFRSF11A-201ENST00000269485 COPS6Q7L5N1 327 aa17.21■□□□□ 0.35
TNFRSF11A-201ENST00000269485 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.21■□□□□ 0.35
TNFRSF11A-201ENST00000269485 UBE3BQ7Z3V4 1068 aa17.21■□□□□ 0.35
TNFRSF11A-201ENST00000269485 GRPEL1Q9HAV7 217 aa17.21■□□□□ 0.35
TNFRSF11A-201ENST00000269485 IGSF1Q8N6C5 1336 aa17.21■□□□□ 0.35
TNFRSF11A-201ENST00000269485 DLC1Q96QB1 1528 aa17.2■□□□□ 0.34
TNFRSF11A-201ENST00000269485 SDSP20132 328 aa17.2■□□□□ 0.34
TNFRSF11A-201ENST00000269485 CEP85Q6P2H3 762 aa17.2■□□□□ 0.34
TNFRSF11A-201ENST00000269485 SMIM5Q71RC9 77 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms