RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 MAST1Q9Y2H9 1570 aa16.38■□□□□ 0.21
NPC1-201ENST00000269228 IL16Q14005 1332 aa16.38■□□□□ 0.21
NPC1-201ENST00000269228 SLC39A6Q13433 755 aa16.37■□□□□ 0.21
NPC1-201ENST00000269228 BOLA2Q9H3K6 86 aa16.37■□□□□ 0.21
NPC1-201ENST00000269228 A0A1W2PP64 1363 aa16.37■□□□□ 0.21
NPC1-201ENST00000269228 PDCP20941 246 aa16.37■□□□□ 0.21
NPC1-201ENST00000269228 GLRX3O76003 335 aaKnown RBP16.36■□□□□ 0.21
NPC1-201ENST00000269228 IFIT1P09914 478 aaKnown RBP16.36■□□□□ 0.21
NPC1-201ENST00000269228 ACSBG1Q96GR2 724 aa16.36■□□□□ 0.21
NPC1-201ENST00000269228 CCDC8Q9H0W5 538 aaPredicted RBP16.36■□□□□ 0.21
NPC1-201ENST00000269228 FLT4P35916 1363 aa16.36■□□□□ 0.21
NPC1-201ENST00000269228 SASS6Q6UVJ0 657 aa16.36■□□□□ 0.21
NPC1-201ENST00000269228 ZSCAN29Q8IWY8 852 aaPredicted RBP16.36■□□□□ 0.21
NPC1-201ENST00000269228 TPM1P09493 284 aa16.36■□□□□ 0.21
NPC1-201ENST00000269228 BLOC1S2Q6QNY1 142 aa16.36■□□□□ 0.21
NPC1-201ENST00000269228 NEO1Q92859 1461 aa16.36■□□□□ 0.21
NPC1-201ENST00000269228 ARHGEF12Q9NZN5 1544 aa16.36■□□□□ 0.21
NPC1-201ENST00000269228 UHRF1BP1Q6BDS2 1440 aa16.35■□□□□ 0.21
NPC1-201ENST00000269228 PCMTD1Q96MG8 357 aaPredicted RBP16.35■□□□□ 0.21
NPC1-201ENST00000269228 UBE3BQ7Z3V4 1068 aa16.35■□□□□ 0.21
NPC1-201ENST00000269228 AIDAQ96BJ3 306 aa16.35■□□□□ 0.21
NPC1-201ENST00000269228 AK7Q96M32 723 aa16.35■□□□□ 0.21
NPC1-201ENST00000269228 ANKIB1Q9P2G1 1089 aa16.35■□□□□ 0.21
NPC1-201ENST00000269228 CTNNA3Q9UI47 895 aa16.35■□□□□ 0.21
NPC1-201ENST00000269228 MAGI3Q5TCQ9 1506 aa16.35■□□□□ 0.21
NPC1-201ENST00000269228 SKAP1Q86WV1 359 aa16.35■□□□□ 0.21
NPC1-201ENST00000269228 CFAP65Q6ZU64 1925 aaKnown RBP16.35■□□□□ 0.21
NPC1-201ENST00000269228 MTHFSDQ2M296 383 aaKnown RBP16.34■□□□□ 0.21
NPC1-201ENST00000269228 NUP133Q8WUM0 1156 aa16.34■□□□□ 0.21
NPC1-201ENST00000269228 JARID2Q92833 1246 aaPredicted RBP16.34■□□□□ 0.21
NPC1-201ENST00000269228 JAKMIP1Q96N16 626 aaKnown RBP16.34■□□□□ 0.21
NPC1-201ENST00000269228 CAVIN4Q5BKX8 364 aa16.34■□□□□ 0.21
NPC1-201ENST00000269228 ANKRD20A12PQ8NF67 263 aa16.34■□□□□ 0.21
NPC1-201ENST00000269228 SDF4Q9BRK5 362 aa16.34■□□□□ 0.21
NPC1-201ENST00000269228 PIK3R4Q99570 1358 aa16.34■□□□□ 0.21
NPC1-201ENST00000269228 ANKRD18BA2A2Z9 1011 aa16.34■□□□□ 0.21
NPC1-201ENST00000269228 ANKRD1Q15327 319 aa16.34■□□□□ 0.21
NPC1-201ENST00000269228 AKAP4Q5JQC9 854 aa16.34■□□□□ 0.21
NPC1-201ENST00000269228 CEP89Q96ST8 783 aa16.34■□□□□ 0.21
NPC1-201ENST00000269228 PARD3Q8TEW0 1356 aa16.34■□□□□ 0.21
NPC1-201ENST00000269228 KAT6BQ8WYB5 2073 aa16.34■□□□□ 0.21
NPC1-201ENST00000269228 CCDC69A6NI79 296 aa16.33■□□□□ 0.21
NPC1-201ENST00000269228 TRPM2O94759 1503 aa16.33■□□□□ 0.21
NPC1-201ENST00000269228 NOC3LQ8WTT2 800 aaKnown RBP16.33■□□□□ 0.21
NPC1-201ENST00000269228 ARID3AQ99856 593 aa16.33■□□□□ 0.21
NPC1-201ENST00000269228 ORAI2Q96SN7 254 aa16.33■□□□□ 0.21
NPC1-201ENST00000269228 CWC25Q9NXE8 425 aaPredicted RBP16.33■□□□□ 0.21
NPC1-201ENST00000269228 DDB1Q16531 1140 aa16.33■□□□□ 0.2
NPC1-201ENST00000269228 CHPF2Q9P2E5 772 aa16.33■□□□□ 0.2
NPC1-201ENST00000269228 ANKRD13DQ6ZTN6 518 aa16.33■□□□□ 0.2
NPC1-201ENST00000269228 EYA1Q99502 592 aa16.33■□□□□ 0.2
NPC1-201ENST00000269228 NFKBIBQ15653 356 aa16.32■□□□□ 0.2
NPC1-201ENST00000269228 LMTK3Q96Q04 1460 aa16.32■□□□□ 0.2
NPC1-201ENST00000269228 CEBPZQ03701 1054 aaKnown RBP16.32■□□□□ 0.2
NPC1-201ENST00000269228 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.32■□□□□ 0.2
NPC1-201ENST00000269228 IL2RBP14784 551 aa16.32■□□□□ 0.2
NPC1-201ENST00000269228 TRIM22Q8IYM9 498 aa16.32■□□□□ 0.2
NPC1-201ENST00000269228 POLR3AO14802 1390 aaPredicted RBP16.32■□□□□ 0.2
NPC1-201ENST00000269228 MAP3K19Q56UN5 1328 aa16.32■□□□□ 0.2
NPC1-201ENST00000269228 YEATS2Q9ULM3 1422 aa16.32■□□□□ 0.2
NPC1-201ENST00000269228 RPGRQ92834 1020 aaKnown RBP16.32■□□□□ 0.2
NPC1-201ENST00000269228 UBAC1Q9BSL1 405 aa16.31■□□□□ 0.2
NPC1-201ENST00000269228 BCL11BQ9C0K0 894 aaPredicted RBP16.31■□□□□ 0.2
NPC1-201ENST00000269228 PDRG1Q9NUG6 133 aa16.31■□□□□ 0.2
NPC1-201ENST00000269228 FIBPO43427 364 aa16.31■□□□□ 0.2
NPC1-201ENST00000269228 ZNF219Q9P2Y4 722 aaPredicted RBP16.31■□□□□ 0.2
NPC1-201ENST00000269228 C8orf58Q8NAV2 365 aa16.31■□□□□ 0.2
NPC1-201ENST00000269228 ANO8Q9HCE9 1232 aaPredicted RBP16.31■□□□□ 0.2
NPC1-201ENST00000269228 ZFYVE16Q7Z3T8 1539 aa16.3■□□□□ 0.2
NPC1-201ENST00000269228 XAGE3Q8WTP9 111 aa16.3■□□□□ 0.2
NPC1-201ENST00000269228 K7ELQ4 463 aaPredicted RBP16.3■□□□□ 0.2
NPC1-201ENST00000269228 HOXC9P31274 260 aa16.3■□□□□ 0.2
NPC1-201ENST00000269228 LDHAL6AQ6ZMR3 332 aa16.3■□□□□ 0.2
NPC1-201ENST00000269228 PPP1R42Q7Z4L9 355 aa16.3■□□□□ 0.2
NPC1-201ENST00000269228 RFC4P35249 363 aa16.3■□□□□ 0.2
NPC1-201ENST00000269228 PIP4K2AP48426 406 aaPredicted RBP16.3■□□□□ 0.2
NPC1-201ENST00000269228 COPS6Q7L5N1 327 aa16.3■□□□□ 0.2
NPC1-201ENST00000269228 NFATC2IPQ8NCF5 419 aa16.3■□□□□ 0.2
NPC1-201ENST00000269228 PHACTR3Q96KR7 559 aa16.3■□□□□ 0.2
NPC1-201ENST00000269228 SLC5A1P13866 664 aa16.29■□□□□ 0.2
NPC1-201ENST00000269228 STK38Q15208 465 aa16.29■□□□□ 0.2
NPC1-201ENST00000269228 ATP6V1AP38606 617 aa16.29■□□□□ 0.2
NPC1-201ENST00000269228 KRT32Q14532 448 aa16.29■□□□□ 0.2
NPC1-201ENST00000269228 IMMTQ16891 758 aaKnown RBP16.29■□□□□ 0.2
NPC1-201ENST00000269228 PRPF40AO75400 957 aaKnown RBP16.29■□□□□ 0.2
NPC1-201ENST00000269228 CCAR1Q8IX12 1150 aaKnown RBP16.29■□□□□ 0.2
NPC1-201ENST00000269228 IP6K1Q92551 441 aa16.28■□□□□ 0.2
NPC1-201ENST00000269228 VSIG10Q8N0Z9 540 aa16.28■□□□□ 0.2
NPC1-201ENST00000269228 TMEM2Q9UHN6 1383 aa16.27■□□□□ 0.2
NPC1-201ENST00000269228 CASTP20810 708 aaKnown RBP16.27■□□□□ 0.2
NPC1-201ENST00000269228 LARP1BQ659C4 914 aaKnown RBP16.27■□□□□ 0.2
NPC1-201ENST00000269228 ZNF396Q96N95 335 aaPredicted RBP16.27■□□□□ 0.2
NPC1-201ENST00000269228 LTKP29376 864 aa16.27■□□□□ 0.19
NPC1-201ENST00000269228 PRPF40BQ6NWY9 871 aaKnown RBP16.27■□□□□ 0.19
NPC1-201ENST00000269228 TMOD2Q9NZR1 351 aa16.27■□□□□ 0.19
NPC1-201ENST00000269228 ABCA8O94911 1581 aa16.27■□□□□ 0.19
NPC1-201ENST00000269228 MINDY4BA8MYZ0 360 aa16.27■□□□□ 0.19
NPC1-201ENST00000269228 PER1O15534 1290 aaPredicted RBP16.27■□□□□ 0.19
NPC1-201ENST00000269228 MAP3K12Q12852 859 aa16.26■□□□□ 0.19
NPC1-201ENST00000269228 BTG4Q9NY30 223 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms