RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 FLT4P35916 1363 aa15.4■□□□□ 0.06
BEST3-201ENST00000266661 SDSP20132 328 aa15.4■□□□□ 0.06
BEST3-201ENST00000266661 MRE11P49959 708 aa15.4■□□□□ 0.06
BEST3-201ENST00000266661 RABEP1Q15276 862 aa15.4■□□□□ 0.06
BEST3-201ENST00000266661 G2E3Q7L622 706 aa15.4■□□□□ 0.06
BEST3-201ENST00000266661 PANK2Q9BZ23 570 aa15.4■□□□□ 0.06
BEST3-201ENST00000266661 OSBPL3Q9H4L5 887 aa15.4■□□□□ 0.06
BEST3-201ENST00000266661 NHSL1Q5SYE7 1610 aa15.4■□□□□ 0.06
BEST3-201ENST00000266661 SLC4A2P04920 1241 aa15.4■□□□□ 0.06
BEST3-201ENST00000266661 GBP4Q96PP9 640 aa15.4■□□□□ 0.06
BEST3-201ENST00000266661 PLEKHG5O94827 1062 aa15.39■□□□□ 0.05
BEST3-201ENST00000266661 SALL3Q9BXA9 1300 aa15.38■□□□□ 0.05
BEST3-201ENST00000266661 HTATSF1O43719 755 aaKnown RBP15.38■□□□□ 0.05
BEST3-201ENST00000266661 SMARCA5O60264 1052 aaPredicted RBP15.38■□□□□ 0.05
BEST3-201ENST00000266661 EYA1Q99502 592 aa15.38■□□□□ 0.05
BEST3-201ENST00000266661 ANKARQ7Z5J8 1434 aa15.38■□□□□ 0.05
BEST3-201ENST00000266661 PIK3C2AO00443 1686 aa15.38■□□□□ 0.05
BEST3-201ENST00000266661 CYP2E1P05181 493 aaPredicted RBP15.37■□□□□ 0.05
BEST3-201ENST00000266661 PTMSP20962 102 aa15.37■□□□□ 0.05
BEST3-201ENST00000266661 SKOR2Q2VWA4 1001 aaPredicted RBP15.37■□□□□ 0.05
BEST3-201ENST00000266661 NGDNQ8NEJ9 315 aaKnown RBP15.37■□□□□ 0.05
BEST3-201ENST00000266661 MIS18AQ9NYP9 233 aa15.37■□□□□ 0.05
BEST3-201ENST00000266661 SSFA2P28290 1259 aa15.37■□□□□ 0.05
BEST3-201ENST00000266661 CCT4P50991 539 aaKnown RBP15.37■□□□□ 0.05
BEST3-201ENST00000266661 USP54Q70EL1 1684 aa15.37■□□□□ 0.05
BEST3-201ENST00000266661 GAS2L3Q86XJ1 694 aa15.36■□□□□ 0.05
BEST3-201ENST00000266661 GRPEL1Q9HAV7 217 aa15.36■□□□□ 0.05
BEST3-201ENST00000266661 COL16A1Q07092 1604 aaPredicted RBP15.36■□□□□ 0.05
BEST3-201ENST00000266661 MARF1Q9Y4F3 1742 aaKnown RBP15.36■□□□□ 0.05
BEST3-201ENST00000266661 KIF1AQ12756 1690 aa15.36■□□□□ 0.05
BEST3-201ENST00000266661 PSME1Q06323 249 aa15.35■□□□□ 0.05
BEST3-201ENST00000266661 TSPYL4Q9UJ04 414 aa15.35■□□□□ 0.05
BEST3-201ENST00000266661 KRT28Q7Z3Y7 464 aa15.35■□□□□ 0.05
BEST3-201ENST00000266661 FOXD4L1Q9NU39 408 aa15.35■□□□□ 0.05
BEST3-201ENST00000266661 F6X3S4 739 aa15.34■□□□□ 0.05
BEST3-201ENST00000266661 TUBGCP6Q96RT7 1819 aa15.34■□□□□ 0.05
BEST3-201ENST00000266661 AHDC1Q5TGY3 1603 aaPredicted RBP15.34■□□□□ 0.05
BEST3-201ENST00000266661 PXDNQ92626 1479 aa15.34■□□□□ 0.05
BEST3-201ENST00000266661 HMMRO75330 724 aa15.33■□□□□ 0.05
BEST3-201ENST00000266661 PDE1AP54750 535 aa15.33■□□□□ 0.05
BEST3-201ENST00000266661 FAM208AQ9UK61 1670 aaKnown RBP15.33■□□□□ 0.04
BEST3-201ENST00000266661 SOS1Q07889 1333 aaPredicted RBP15.33■□□□□ 0.04
BEST3-201ENST00000266661 BAG4O95429 457 aaKnown RBP15.33■□□□□ 0.04
BEST3-201ENST00000266661 RTF1Q92541 710 aaKnown RBP15.33■□□□□ 0.04
BEST3-201ENST00000266661 N4BP2Q86UW6 1770 aaPredicted RBP15.32■□□□□ 0.04
BEST3-201ENST00000266661 NUTM2GQ5VZR2 741 aa15.32■□□□□ 0.04
BEST3-201ENST00000266661 LMOD2Q6P5Q4 547 aa15.32■□□□□ 0.04
BEST3-201ENST00000266661 TRPM3Q9HCF6 1732 aaPredicted RBP15.32■□□□□ 0.04
BEST3-201ENST00000266661 SOS2Q07890 1332 aaPredicted RBP15.32■□□□□ 0.04
BEST3-201ENST00000266661 NPHP3Q7Z494 1330 aa15.32■□□□□ 0.04
BEST3-201ENST00000266661 IBTKQ9P2D0 1353 aaPredicted RBP15.32■□□□□ 0.04
BEST3-201ENST00000266661 GNAI2P04899 355 aa15.31■□□□□ 0.04
BEST3-201ENST00000266661 HSP90AA1P07900 732 aaKnown RBP15.31■□□□□ 0.04
BEST3-201ENST00000266661 BABAM1Q9NWV8 329 aa15.31■□□□□ 0.04
BEST3-201ENST00000266661 SOX12O15370 315 aa15.31■□□□□ 0.04
BEST3-201ENST00000266661 IL17RAQ96F46 866 aa15.31■□□□□ 0.04
BEST3-201ENST00000266661 ERC2O15083 957 aa15.3■□□□□ 0.04
BEST3-201ENST00000266661 REC8O95072 547 aa15.3■□□□□ 0.04
BEST3-201ENST00000266661 HOXC9P31274 260 aa15.3■□□□□ 0.04
BEST3-201ENST00000266661 NUCB2P80303 420 aa15.3■□□□□ 0.04
BEST3-201ENST00000266661 ATP8B2P98198 1209 aa15.3■□□□□ 0.04
BEST3-201ENST00000266661 KLHL40Q2TBA0 621 aa15.3■□□□□ 0.04
BEST3-201ENST00000266661 IL17REQ8NFR9 667 aa15.3■□□□□ 0.04
BEST3-201ENST00000266661 CWC22Q9HCG8 908 aaKnown RBP15.3■□□□□ 0.04
BEST3-201ENST00000266661 PXDNLA1KZ92 1463 aa15.29■□□□□ 0.04
BEST3-201ENST00000266661 AMPHP49418 695 aa15.29■□□□□ 0.04
BEST3-201ENST00000266661 FLIIQ13045 1269 aa15.29■□□□□ 0.04
BEST3-201ENST00000266661 CASC1Q6TDU7 716 aa15.29■□□□□ 0.04
BEST3-201ENST00000266661 GNAT3A8MTJ3 354 aa15.29■□□□□ 0.04
BEST3-201ENST00000266661 APBB1O00213 710 aa15.29■□□□□ 0.04
BEST3-201ENST00000266661 CLCN1P35523 988 aa15.29■□□□□ 0.04
BEST3-201ENST00000266661 CCDC30Q5VVM6 783 aa15.29■□□□□ 0.04
BEST3-201ENST00000266661 SLC4A10Q6U841 1118 aa15.29■□□□□ 0.04
BEST3-201ENST00000266661 CABLES1Q8TDN4 633 aa15.29■□□□□ 0.04
BEST3-201ENST00000266661 ARXQ96QS3 562 aa15.29■□□□□ 0.04
BEST3-201ENST00000266661 STAP2Q9UGK3 403 aa15.29■□□□□ 0.04
BEST3-201ENST00000266661 GNAI3P08754 354 aa15.28■□□□□ 0.04
BEST3-201ENST00000266661 ZDHHC9Q9Y397 364 aa15.28■□□□□ 0.04
BEST3-201ENST00000266661 PNMA6EA0A0J9YXQ4 647 aa15.27■□□□□ 0.04
BEST3-201ENST00000266661 STK31Q9BXU1 1019 aa15.27■□□□□ 0.04
BEST3-201ENST00000266661 LMBRD1Q9NUN5 540 aa15.27■□□□□ 0.04
BEST3-201ENST00000266661 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.27■□□□□ 0.04
BEST3-201ENST00000266661 MAP3K5Q99683 1374 aa15.27■□□□□ 0.04
BEST3-201ENST00000266661 ALS2Q96Q42 1657 aa15.27■□□□□ 0.03
BEST3-201ENST00000266661 PKP1Q13835 747 aa15.27■□□□□ 0.03
BEST3-201ENST00000266661 LRRC59Q96AG4 307 aaKnown RBP15.27■□□□□ 0.03
BEST3-201ENST00000266661 EXOC6BQ9Y2D4 811 aa15.27■□□□□ 0.03
BEST3-201ENST00000266661 CACNA1FO60840 1977 aa15.26■□□□□ 0.03
BEST3-201ENST00000266661 ST18O60284 1047 aa15.26■□□□□ 0.03
BEST3-201ENST00000266661 NLRP6P59044 892 aa15.26■□□□□ 0.03
BEST3-201ENST00000266661 MED1Q15648 1581 aaPredicted RBP15.26■□□□□ 0.03
BEST3-201ENST00000266661 SPATA31A3Q5VYP0 1347 aa15.26■□□□□ 0.03
BEST3-201ENST00000266661 ESYT1Q9BSJ8 1104 aa15.26■□□□□ 0.03
BEST3-201ENST00000266661 LRRCC1Q9C099 1032 aa15.26■□□□□ 0.03
BEST3-201ENST00000266661 NUTM2BA6NNL0 878 aaPredicted RBP15.25■□□□□ 0.03
BEST3-201ENST00000266661 NUTM2EB1AL46 878 aaPredicted RBP15.25■□□□□ 0.03
BEST3-201ENST00000266661 GOLGA6L22H0YM25 854 aa15.25■□□□□ 0.03
BEST3-201ENST00000266661 TAF7Q15545 349 aaPredicted RBP15.25■□□□□ 0.03
BEST3-201ENST00000266661 NUTM2AQ8IVF1 878 aaPredicted RBP15.25■□□□□ 0.03
BEST3-201ENST00000266661 ZGPATQ8N5A5 531 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms