RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 NEO1Q92859 1461 aa20.51■□□□□ 0.87
SQLE-201ENST00000265896 MX1P20591 662 aa20.51■□□□□ 0.87
SQLE-201ENST00000265896 FLIIQ13045 1269 aa20.51■□□□□ 0.87
SQLE-201ENST00000265896 CDK12Q9NYV4 1490 aaPredicted RBP20.51■□□□□ 0.87
SQLE-201ENST00000265896 ZSCAN30Q86W11 494 aa20.5■□□□□ 0.87
SQLE-201ENST00000265896 LRRCC1Q9C099 1032 aa20.5■□□□□ 0.87
SQLE-201ENST00000265896 PLCB2Q00722 1185 aa20.49■□□□□ 0.87
SQLE-201ENST00000265896 ESYT1Q9BSJ8 1104 aa20.49■□□□□ 0.87
SQLE-201ENST00000265896 ANKRD26Q9UPS8 1709 aa20.49■□□□□ 0.87
SQLE-201ENST00000265896 ZNF830Q96NB3 372 aaPredicted RBP20.49■□□□□ 0.87
SQLE-201ENST00000265896 LTKP29376 864 aa20.48■□□□□ 0.87
SQLE-201ENST00000265896 JARID2Q92833 1246 aaPredicted RBP20.48■□□□□ 0.87
SQLE-201ENST00000265896 FAM13BQ9NYF5 915 aa20.47■□□□□ 0.87
SQLE-201ENST00000265896 TSPOAP1O95153 1857 aa20.47■□□□□ 0.87
SQLE-201ENST00000265896 NLRP6P59044 892 aa20.47■□□□□ 0.87
SQLE-201ENST00000265896 ISY1Q9ULR0 285 aaKnown RBP20.47■□□□□ 0.87
SQLE-201ENST00000265896 PTPRCP08575 1304 aa20.46■□□□□ 0.87
SQLE-201ENST00000265896 AATKQ6ZMQ8 1374 aa20.46■□□□□ 0.87
SQLE-201ENST00000265896 SURF6O75683 361 aaKnown RBP20.46■□□□□ 0.87
SQLE-201ENST00000265896 SPG7Q9UQ90 795 aa20.46■□□□□ 0.87
SQLE-201ENST00000265896 CHMLP26374 656 aa20.46■□□□□ 0.87
SQLE-201ENST00000265896 PPP1R9BQ96SB3 815 aa20.46■□□□□ 0.87
SQLE-201ENST00000265896 ZNF445P59923 1031 aa20.44■□□□□ 0.86
SQLE-201ENST00000265896 CHMP3Q9Y3E7 222 aa20.44■□□□□ 0.86
SQLE-201ENST00000265896 CDC42BPGQ6DT37 1551 aa20.44■□□□□ 0.86
SQLE-201ENST00000265896 PTMAP06454 111 aaKnown RBP20.44■□□□□ 0.86
SQLE-201ENST00000265896 C17orf53Q8N3J3 647 aaPredicted RBP20.43■□□□□ 0.86
SQLE-201ENST00000265896 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.43■□□□□ 0.86
SQLE-201ENST00000265896 PTMSP20962 102 aa20.43■□□□□ 0.86
SQLE-201ENST00000265896 CCT4P50991 539 aaKnown RBP20.43■□□□□ 0.86
SQLE-201ENST00000265896 CWC27Q6UX04 472 aaKnown RBP20.43■□□□□ 0.86
SQLE-201ENST00000265896 CWC22Q9HCG8 908 aaKnown RBP20.43■□□□□ 0.86
SQLE-201ENST00000265896 RIMS1Q86UR5 1692 aaKnown RBP20.43■□□□□ 0.86
SQLE-201ENST00000265896 CLTCQ00610 1675 aaKnown RBP20.43■□□□□ 0.86
SQLE-201ENST00000265896 CRB1P82279 1406 aa20.42■□□□□ 0.86
SQLE-201ENST00000265896 CLEC17AQ6ZS10 378 aa20.42■□□□□ 0.86
SQLE-201ENST00000265896 IL17REQ8NFR9 667 aa20.42■□□□□ 0.86
SQLE-201ENST00000265896 RICTORQ6R327 1708 aa20.42■□□□□ 0.86
SQLE-201ENST00000265896 KCNQ3O43525 872 aa20.41■□□□□ 0.86
SQLE-201ENST00000265896 NBPF7P0C2Y1 421 aaPredicted RBP20.41■□□□□ 0.86
SQLE-201ENST00000265896 USP44Q9H0E7 712 aa20.41■□□□□ 0.86
SQLE-201ENST00000265896 UBTFL1P0CB47 393 aaPredicted RBP20.41■□□□□ 0.86
SQLE-201ENST00000265896 PPP1R42Q7Z4L9 355 aa20.41■□□□□ 0.86
SQLE-201ENST00000265896 TSC1Q92574 1164 aa20.41■□□□□ 0.86
SQLE-201ENST00000265896 HDGFL1Q5TGJ6 251 aa20.4■□□□□ 0.86
SQLE-201ENST00000265896 FAM177BA6PVY3 158 aa20.4■□□□□ 0.86
SQLE-201ENST00000265896 SRGAP3O43295 1099 aa20.4■□□□□ 0.86
SQLE-201ENST00000265896 USP48Q86UV5 1035 aa20.4■□□□□ 0.86
SQLE-201ENST00000265896 DLC1Q96QB1 1528 aa20.39■□□□□ 0.85
SQLE-201ENST00000265896 LRSAM1Q6UWE0 723 aa20.39■□□□□ 0.85
SQLE-201ENST00000265896 RASEFQ8IZ41 740 aa20.39■□□□□ 0.85
SQLE-201ENST00000265896 CNPY2Q9Y2B0 182 aa20.39■□□□□ 0.85
SQLE-201ENST00000265896 FIBPO43427 364 aa20.39■□□□□ 0.85
SQLE-201ENST00000265896 HAP1P54257 671 aaPredicted RBP20.39■□□□□ 0.85
SQLE-201ENST00000265896 OS9Q13438 667 aaPredicted RBP20.39■□□□□ 0.85
SQLE-201ENST00000265896 AMOTL2Q9Y2J4 779 aa20.38■□□□□ 0.85
SQLE-201ENST00000265896 MCCP23508 829 aa20.38■□□□□ 0.85
SQLE-201ENST00000265896 ATP8B2P98198 1209 aa20.38■□□□□ 0.85
SQLE-201ENST00000265896 COL9A3Q14050 684 aaPredicted RBP20.37■□□□□ 0.85
SQLE-201ENST00000265896 CCDC30Q5VVM6 783 aa20.37■□□□□ 0.85
SQLE-201ENST00000265896 TCEANC2Q96MN5 208 aa20.37■□□□□ 0.85
SQLE-201ENST00000265896 BRD1O95696 1058 aa20.37■□□□□ 0.85
SQLE-201ENST00000265896 LGR6Q9HBX8 967 aa20.37■□□□□ 0.85
SQLE-201ENST00000265896 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.37■□□□□ 0.85
SQLE-201ENST00000265896 KIAA0232Q92628 1395 aa20.36■□□□□ 0.85
SQLE-201ENST00000265896 USP25Q9UHP3 1055 aa20.36■□□□□ 0.85
SQLE-201ENST00000265896 SOS1Q07889 1333 aaPredicted RBP20.36■□□□□ 0.85
SQLE-201ENST00000265896 GNAT3A8MTJ3 354 aa20.36■□□□□ 0.85
SQLE-201ENST00000265896 TAF7Q15545 349 aaPredicted RBP20.36■□□□□ 0.85
SQLE-201ENST00000265896 PA2G4Q9UQ80 394 aaKnown RBP20.36■□□□□ 0.85
SQLE-201ENST00000265896 ABTB2Q8N961 1025 aa20.35■□□□□ 0.85
SQLE-201ENST00000265896 OFD1O75665 1012 aa20.35■□□□□ 0.85
SQLE-201ENST00000265896 LARGE1O95461 756 aa20.35■□□□□ 0.85
SQLE-201ENST00000265896 GNAI3P08754 354 aa20.35■□□□□ 0.85
SQLE-201ENST00000265896 ZMYND15Q9H091 742 aa20.35■□□□□ 0.85
SQLE-201ENST00000265896 DNTTIP2Q5QJE6 756 aaKnown RBP20.34■□□□□ 0.85
SQLE-201ENST00000265896 SRCIN1Q9C0H9 1055 aa20.34■□□□□ 0.85
SQLE-201ENST00000265896 CHPF2Q9P2E5 772 aa20.34■□□□□ 0.85
SQLE-201ENST00000265896 PI4KAP2A4QPH2 592 aa20.34■□□□□ 0.85
SQLE-201ENST00000265896 PI4KAP1Q8N8J0 262 aa20.34■□□□□ 0.85
SQLE-201ENST00000265896 BCL11BQ9C0K0 894 aaPredicted RBP20.34■□□□□ 0.85
SQLE-201ENST00000265896 OSBPL3Q9H4L5 887 aa20.34■□□□□ 0.85
SQLE-201ENST00000265896 KIF24Q5T7B8 1368 aa20.34■□□□□ 0.85
SQLE-201ENST00000265896 RRP9O43818 475 aaKnown RBP20.33■□□□□ 0.85
SQLE-201ENST00000265896 HCLS1P14317 486 aaPredicted RBP20.33■□□□□ 0.85
SQLE-201ENST00000265896 FAM173BQ6P4H8 233 aa20.33■□□□□ 0.85
SQLE-201ENST00000265896 SALL3Q9BXA9 1300 aa20.33■□□□□ 0.85
SQLE-201ENST00000265896 CEP170BQ9Y4F5 1589 aaPredicted RBP20.33■□□□□ 0.85
SQLE-201ENST00000265896 RIMBP3CA6NJZ7 1639 aa20.33■□□□□ 0.85
SQLE-201ENST00000265896 RIMBP3BA6NNM3 1639 aa20.33■□□□□ 0.85
SQLE-201ENST00000265896 RIMBP3Q9UFD9 1639 aa20.33■□□□□ 0.85
SQLE-201ENST00000265896 UQCRHLA0A096LP55 91 aa20.33■□□□□ 0.84
SQLE-201ENST00000265896 UQCRHP07919 91 aa20.33■□□□□ 0.84
SQLE-201ENST00000265896 TTC12Q9H892 705 aaPredicted RBP20.33■□□□□ 0.84
SQLE-201ENST00000265896 USP6P35125 1406 aa20.32■□□□□ 0.84
SQLE-201ENST00000265896 PRAMEF22A3QJZ6 481 aa20.32■□□□□ 0.84
SQLE-201ENST00000265896 AK2P54819 239 aa20.32■□□□□ 0.84
SQLE-201ENST00000265896 LMOD2Q6P5Q4 547 aa20.32■□□□□ 0.84
SQLE-201ENST00000265896 NECAB1Q8N987 351 aa20.32■□□□□ 0.84
SQLE-201ENST00000265896 NOL7Q9UMY1 257 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms