RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 SSH2Q76I76 1423 aa11.76□□□□□ -0.53
SIM1-201ENST00000262901 FAM193AP78312 1265 aa11.75□□□□□ -0.53
SIM1-201ENST00000262901 ZNF530Q6P9A1 599 aaPredicted RBP11.75□□□□□ -0.53
SIM1-201ENST00000262901 KIF1AQ12756 1690 aa11.75□□□□□ -0.53
SIM1-201ENST00000262901 FRAT2O75474 233 aaPredicted RBP11.75□□□□□ -0.53
SIM1-201ENST00000262901 AMOTQ4VCS5 1084 aa11.75□□□□□ -0.53
SIM1-201ENST00000262901 SPG7Q9UQ90 795 aa11.75□□□□□ -0.53
SIM1-201ENST00000262901 ZRSR1Q15695 479 aaKnown RBP11.75□□□□□ -0.53
SIM1-201ENST00000262901 PNPLA6Q8IY17 1366 aa11.75□□□□□ -0.53
SIM1-201ENST00000262901 BLMP54132 1417 aaPredicted RBP11.74□□□□□ -0.53
SIM1-201ENST00000262901 STRCQ7RTU9 1775 aa11.74□□□□□ -0.53
SIM1-201ENST00000262901 GOLGA6L4A6NEF3 574 aa11.74□□□□□ -0.53
SIM1-201ENST00000262901 KIF20BQ96Q89 1820 aa11.74□□□□□ -0.53
SIM1-201ENST00000262901 ZBTB22O15209 634 aa11.74□□□□□ -0.53
SIM1-201ENST00000262901 IRX3P78415 501 aaPredicted RBP11.74□□□□□ -0.53
SIM1-201ENST00000262901 C20orf194Q5TEA3 1177 aa11.74□□□□□ -0.53
SIM1-201ENST00000262901 STK31Q9BXU1 1019 aa11.74□□□□□ -0.53
SIM1-201ENST00000262901 KIAA0232Q92628 1395 aa11.73□□□□□ -0.53
SIM1-201ENST00000262901 PPP4R3BQ5MIZ7 849 aa11.73□□□□□ -0.53
SIM1-201ENST00000262901 USP19O94966 1318 aa11.73□□□□□ -0.53
SIM1-201ENST00000262901 TICAM2Q86XR7 235 aa11.73□□□□□ -0.53
SIM1-201ENST00000262901 NGLY1Q96IV0 654 aa11.72□□□□□ -0.53
SIM1-201ENST00000262901 GNAT3A8MTJ3 354 aa11.72□□□□□ -0.53
SIM1-201ENST00000262901 CCDC27Q2M243 656 aa11.72□□□□□ -0.53
SIM1-201ENST00000262901 HDAC5Q9UQL6 1122 aa11.72□□□□□ -0.53
SIM1-201ENST00000262901 KIAA1211Q6ZU35 1233 aa11.72□□□□□ -0.53
SIM1-201ENST00000262901 MON2Q7Z3U7 1717 aa11.72□□□□□ -0.53
SIM1-201ENST00000262901 DDX19BQ9UMR2 479 aa11.71□□□□□ -0.53
SIM1-201ENST00000262901 NECTIN2Q92692 538 aa11.71□□□□□ -0.53
SIM1-201ENST00000262901 DDX49Q9Y6V7 483 aaKnown RBP11.71□□□□□ -0.53
SIM1-201ENST00000262901 SLFN5Q08AF3 891 aa11.71□□□□□ -0.54
SIM1-201ENST00000262901 TMEM132AQ24JP5 1023 aa11.71□□□□□ -0.54
SIM1-201ENST00000262901 NBPF6Q5VWK0 638 aa11.71□□□□□ -0.54
SIM1-201ENST00000262901 TSR2Q969E8 191 aaKnown RBP11.71□□□□□ -0.54
SIM1-201ENST00000262901 PHACTR3Q96KR7 559 aa11.71□□□□□ -0.54
SIM1-201ENST00000262901 NBPF4Q96M43 638 aa11.71□□□□□ -0.54
SIM1-201ENST00000262901 TOPAZ1Q8N9V7 1692 aa11.71□□□□□ -0.54
SIM1-201ENST00000262901 CHMP4CQ96CF2 233 aa11.7□□□□□ -0.54
SIM1-201ENST00000262901 BTG4Q9NY30 223 aa11.7□□□□□ -0.54
SIM1-201ENST00000262901 TSPYL4Q9UJ04 414 aa11.7□□□□□ -0.54
SIM1-201ENST00000262901 IGSF1Q8N6C5 1336 aa11.7□□□□□ -0.54
SIM1-201ENST00000262901 AKAP12Q02952 1782 aa11.7□□□□□ -0.54
SIM1-201ENST00000262901 RILPL2Q969X0 211 aa11.69□□□□□ -0.54
SIM1-201ENST00000262901 RGPD8O14715 1765 aaPredicted RBP11.69□□□□□ -0.54
SIM1-201ENST00000262901 HMMRO75330 724 aa11.69□□□□□ -0.54
SIM1-201ENST00000262901 C22orf23Q9BZE7 217 aa11.69□□□□□ -0.54
SIM1-201ENST00000262901 ERBB3P21860 1342 aa11.69□□□□□ -0.54
SIM1-201ENST00000262901 MTHFSDQ2M296 383 aaKnown RBP11.69□□□□□ -0.54
SIM1-201ENST00000262901 THUMPD2Q9BTF0 503 aaKnown RBP11.69□□□□□ -0.54
SIM1-201ENST00000262901 PDZRN3Q9UPQ7 1066 aa11.69□□□□□ -0.54
SIM1-201ENST00000262901 IL16Q14005 1332 aa11.68□□□□□ -0.54
SIM1-201ENST00000262901 EXOSC9Q06265 439 aaKnown RBP11.68□□□□□ -0.54
SIM1-201ENST00000262901 MCM10Q7L590 875 aa11.68□□□□□ -0.54
SIM1-201ENST00000262901 DCTN1Q14203 1278 aa11.68□□□□□ -0.54
SIM1-201ENST00000262901 C8orf37Q96NL8 207 aa11.68□□□□□ -0.54
SIM1-201ENST00000262901 PLEKHF1Q96S99 279 aa11.68□□□□□ -0.54
SIM1-201ENST00000262901 HTATSF1O43719 755 aaKnown RBP11.67□□□□□ -0.54
SIM1-201ENST00000262901 DDX54Q8TDD1 881 aaKnown RBP11.67□□□□□ -0.54
SIM1-201ENST00000262901 IFT57Q9NWB7 429 aa11.67□□□□□ -0.54
SIM1-201ENST00000262901 SMAP1Q8IYB5 467 aaPredicted RBP11.67□□□□□ -0.54
SIM1-201ENST00000262901 ZNF330Q9Y3S2 320 aaPredicted RBP11.67□□□□□ -0.54
SIM1-201ENST00000262901 GRIPAP1Q4V328 841 aa11.67□□□□□ -0.54
SIM1-201ENST00000262901 DRC7Q8IY82 874 aa11.67□□□□□ -0.54
SIM1-201ENST00000262901 IL2RBP14784 551 aa11.66□□□□□ -0.54
SIM1-201ENST00000262901 IFNL2Q8IZJ0 200 aa11.66□□□□□ -0.54
SIM1-201ENST00000262901 TTC5Q8N0Z6 440 aa11.66□□□□□ -0.54
SIM1-201ENST00000262901 CHMP5Q9NZZ3 219 aa11.66□□□□□ -0.54
SIM1-201ENST00000262901 ANKRD26Q9UPS8 1709 aa11.66□□□□□ -0.54
SIM1-201ENST00000262901 ST18O60284 1047 aa11.66□□□□□ -0.54
SIM1-201ENST00000262901 CT47B1P0C2W7 299 aaPredicted RBP11.66□□□□□ -0.54
SIM1-201ENST00000262901 C1orf115Q9H7X2 142 aa11.66□□□□□ -0.54
SIM1-201ENST00000262901 AXIN2Q9Y2T1 843 aa11.66□□□□□ -0.54
SIM1-201ENST00000262901 FAM83GA6ND36 823 aa11.66□□□□□ -0.54
SIM1-201ENST00000262901 DDX11L8A8MPP1 907 aa11.66□□□□□ -0.54
SIM1-201ENST00000262901 AKAP4Q5JQC9 854 aa11.66□□□□□ -0.54
SIM1-201ENST00000262901 DUSP27Q5VZP5 1158 aa11.65□□□□□ -0.54
SIM1-201ENST00000262901 WDR17Q8IZU2 1322 aa11.65□□□□□ -0.54
SIM1-201ENST00000262901 JCADQ9P266 1359 aa11.65□□□□□ -0.54
SIM1-201ENST00000262901 ZCRB1Q8TBF4 217 aaKnown RBP11.65□□□□□ -0.55
SIM1-201ENST00000262901 STRCP1A6NGW2 1772 aa11.64□□□□□ -0.55
SIM1-201ENST00000262901 MAP3K5Q99683 1374 aa11.64□□□□□ -0.55
SIM1-201ENST00000262901 PSEN1P49768 467 aa11.64□□□□□ -0.55
SIM1-201ENST00000262901 MPRIPQ6WCQ1 1025 aa11.64□□□□□ -0.55
SIM1-201ENST00000262901 PXDNQ92626 1479 aa11.64□□□□□ -0.55
SIM1-201ENST00000262901 MAP2P11137 1827 aaKnown RBP11.64□□□□□ -0.55
SIM1-201ENST00000262901 CPDO75976 1380 aa11.64□□□□□ -0.55
SIM1-201ENST00000262901 EXOC5O00471 708 aa11.64□□□□□ -0.55
SIM1-201ENST00000262901 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
SIM1-201ENST00000262901 CLCN1P35523 988 aa11.64□□□□□ -0.55
SIM1-201ENST00000262901 CABP4P57796 275 aa11.64□□□□□ -0.55
SIM1-201ENST00000262901 TRIM35Q9UPQ4 493 aa11.64□□□□□ -0.55
SIM1-201ENST00000262901 CARD10Q9BWT7 1032 aa11.63□□□□□ -0.55
SIM1-201ENST00000262901 PIK3C2AO00443 1686 aa11.63□□□□□ -0.55
SIM1-201ENST00000262901 COL3A1P02461 1466 aaPredicted RBP11.63□□□□□ -0.55
SIM1-201ENST00000262901 APPP05067 770 aa11.63□□□□□ -0.55
SIM1-201ENST00000262901 MMP14P50281 582 aa11.63□□□□□ -0.55
SIM1-201ENST00000262901 TWISTNBQ3B726 338 aaPredicted RBP11.63□□□□□ -0.55
SIM1-201ENST00000262901 LARP1Q6PKG0 1096 aaKnown RBP11.63□□□□□ -0.55
SIM1-201ENST00000262901 ZBTB9Q96C00 473 aa11.63□□□□□ -0.55
SIM1-201ENST00000262901 PRR29P0C7W0 189 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms