RNA–Protein interactions for RNA: ENST00000262544.6

SEC23B-201, Transcript of Sec23 homolog B, coat complex II component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEC23B, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-201ENST00000262544 MSNP26038 577 aaKnown RBP15.8■□□□□ 0.12
SEC23B-201ENST00000262544 TMX3Q96JJ7 454 aa15.8■□□□□ 0.12
SEC23B-201ENST00000262544 SETD1BQ9UPS6 1966 aaKnown RBP15.8■□□□□ 0.12
SEC23B-201ENST00000262544 HDGFL1Q5TGJ6 251 aa15.8■□□□□ 0.12
SEC23B-201ENST00000262544 CPA1P15085 419 aa15.79■□□□□ 0.12
SEC23B-201ENST00000262544 CPSF1Q10570 1443 aaKnown RBP15.79■□□□□ 0.12
SEC23B-201ENST00000262544 ATP7BP35670 1465 aa15.79■□□□□ 0.12
SEC23B-201ENST00000262544 UBTFL1P0CB47 393 aaPredicted RBP15.79■□□□□ 0.12
SEC23B-201ENST00000262544 RBSNQ9H1K0 784 aa15.79■□□□□ 0.12
SEC23B-201ENST00000262544 KLHL40Q2TBA0 621 aa15.78■□□□□ 0.12
SEC23B-201ENST00000262544 CHMP3Q9Y3E7 222 aa15.78■□□□□ 0.12
SEC23B-201ENST00000262544 PIK3R4Q99570 1358 aa15.78■□□□□ 0.12
SEC23B-201ENST00000262544 AGLP35573 1532 aa15.78■□□□□ 0.12
SEC23B-201ENST00000262544 IL25Q9H293 177 aa15.78■□□□□ 0.12
SEC23B-201ENST00000262544 CCDC9Q9Y3X0 531 aaKnown RBP15.78■□□□□ 0.12
SEC23B-201ENST00000262544 GPT2Q8TD30 523 aa15.77■□□□□ 0.12
SEC23B-201ENST00000262544 LMBRD1Q9NUN5 540 aa15.77■□□□□ 0.12
SEC23B-201ENST00000262544 SPG7Q9UQ90 795 aa15.77■□□□□ 0.12
SEC23B-201ENST00000262544 EID1Q9Y6B2 187 aa15.77■□□□□ 0.12
SEC23B-201ENST00000262544 PTPRCP08575 1304 aa15.77■□□□□ 0.12
SEC23B-201ENST00000262544 ATP10DQ9P241 1426 aa15.77■□□□□ 0.12
SEC23B-201ENST00000262544 SRGAP3O43295 1099 aa15.77■□□□□ 0.12
SEC23B-201ENST00000262544 CCT4P50991 539 aaKnown RBP15.77■□□□□ 0.12
SEC23B-201ENST00000262544 CWC27Q6UX04 472 aaKnown RBP15.77■□□□□ 0.12
SEC23B-201ENST00000262544 CDK12Q9NYV4 1490 aaPredicted RBP15.77■□□□□ 0.12
SEC23B-201ENST00000262544 NCOA3Q9Y6Q9 1424 aa15.77■□□□□ 0.12
SEC23B-201ENST00000262544 RRP9O43818 475 aaKnown RBP15.77■□□□□ 0.11
SEC23B-201ENST00000262544 PTMAP06454 111 aaKnown RBP15.77■□□□□ 0.11
SEC23B-201ENST00000262544 CCDC30Q5VVM6 783 aa15.77■□□□□ 0.11
SEC23B-201ENST00000262544 ZDHHC9Q9Y397 364 aa15.77■□□□□ 0.11
SEC23B-201ENST00000262544 KIF20BQ96Q89 1820 aa15.76■□□□□ 0.11
SEC23B-201ENST00000262544 GNAT3A8MTJ3 354 aa15.76■□□□□ 0.11
SEC23B-201ENST00000262544 MCCP23508 829 aa15.76■□□□□ 0.11
SEC23B-201ENST00000262544 RBM10P98175 930 aaKnown RBP15.76■□□□□ 0.11
SEC23B-201ENST00000262544 KCNQ3O43525 872 aa15.75■□□□□ 0.11
SEC23B-201ENST00000262544 AIMP1Q12904 312 aaKnown RBP15.75■□□□□ 0.11
SEC23B-201ENST00000262544 CLTCQ00610 1675 aaKnown RBP15.75■□□□□ 0.11
SEC23B-201ENST00000262544 ESYT1Q9BSJ8 1104 aa15.75■□□□□ 0.11
SEC23B-201ENST00000262544 TMEM63CQ9P1W3 806 aa15.75■□□□□ 0.11
SEC23B-201ENST00000262544 PPP1R42Q7Z4L9 355 aa15.75■□□□□ 0.11
SEC23B-201ENST00000262544 IL17REQ8NFR9 667 aa15.75■□□□□ 0.11
SEC23B-201ENST00000262544 AATKQ6ZMQ8 1374 aa15.74■□□□□ 0.11
SEC23B-201ENST00000262544 MPRIPQ6WCQ1 1025 aa15.74■□□□□ 0.11
SEC23B-201ENST00000262544 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.74■□□□□ 0.11
SEC23B-201ENST00000262544 NBPF7P0C2Y1 421 aaPredicted RBP15.74■□□□□ 0.11
SEC23B-201ENST00000262544 TAF7Q15545 349 aaPredicted RBP15.74■□□□□ 0.11
SEC23B-201ENST00000262544 LGR6Q9HBX8 967 aa15.74■□□□□ 0.11
SEC23B-201ENST00000262544 DLG5Q8TDM6 1919 aa15.74■□□□□ 0.11
SEC23B-201ENST00000262544 LRRC59Q96AG4 307 aaKnown RBP15.73■□□□□ 0.11
SEC23B-201ENST00000262544 GNAI3P08754 354 aa15.73■□□□□ 0.11
SEC23B-201ENST00000262544 R3HCC1Q9Y3T6 440 aaKnown RBP15.73■□□□□ 0.11
SEC23B-201ENST00000262544 RGS12O14924 1447 aa15.73■□□□□ 0.11
SEC23B-201ENST00000262544 PI4KAP2A4QPH2 592 aa15.73■□□□□ 0.11
SEC23B-201ENST00000262544 KIAA1211Q6ZU35 1233 aa15.73■□□□□ 0.11
SEC23B-201ENST00000262544 PI4KAP1Q8N8J0 262 aa15.73■□□□□ 0.11
SEC23B-201ENST00000262544 TNRQ92752 1358 aa15.73■□□□□ 0.11
SEC23B-201ENST00000262544 CHMLP26374 656 aa15.72■□□□□ 0.11
SEC23B-201ENST00000262544 CHPF2Q9P2E5 772 aa15.72■□□□□ 0.11
SEC23B-201ENST00000262544 GADD45BO75293 160 aaPredicted RBP15.72■□□□□ 0.11
SEC23B-201ENST00000262544 JARID2Q92833 1246 aaPredicted RBP15.72■□□□□ 0.11
SEC23B-201ENST00000262544 USP44Q9H0E7 712 aa15.72■□□□□ 0.11
SEC23B-201ENST00000262544 TAOK2Q9UL54 1235 aa15.72■□□□□ 0.11
SEC23B-201ENST00000262544 KCNJ4P48050 445 aa15.71■□□□□ 0.11
SEC23B-201ENST00000262544 CCDC173Q0VFZ6 552 aa15.71■□□□□ 0.11
SEC23B-201ENST00000262544 SIL1Q9H173 461 aa15.71■□□□□ 0.11
SEC23B-201ENST00000262544 KNDC1Q76NI1 1749 aa15.71■□□□□ 0.11
SEC23B-201ENST00000262544 PA2G4Q9UQ80 394 aaKnown RBP15.71■□□□□ 0.11
SEC23B-201ENST00000262544 FIBPO43427 364 aa15.71■□□□□ 0.1
SEC23B-201ENST00000262544 TCEANC2Q96MN5 208 aa15.71■□□□□ 0.1
SEC23B-201ENST00000262544 PTMSP20962 102 aa15.7■□□□□ 0.1
SEC23B-201ENST00000262544 ZNF830Q96NB3 372 aaPredicted RBP15.7■□□□□ 0.1
SEC23B-201ENST00000262544 KCNA6P17658 529 aa15.69■□□□□ 0.1
SEC23B-201ENST00000262544 PIP4K2AP48426 406 aaPredicted RBP15.69■□□□□ 0.1
SEC23B-201ENST00000262544 TEFQ10587 303 aa15.69■□□□□ 0.1
SEC23B-201ENST00000262544 DNTTIP2Q5QJE6 756 aaKnown RBP15.69■□□□□ 0.1
SEC23B-201ENST00000262544 CWC22Q9HCG8 908 aaKnown RBP15.69■□□□□ 0.1
SEC23B-201ENST00000262544 HOXC9P31274 260 aa15.69■□□□□ 0.1
SEC23B-201ENST00000262544 ATP8B2P98198 1209 aa15.69■□□□□ 0.1
SEC23B-201ENST00000262544 SRCIN1Q9C0H9 1055 aa15.69■□□□□ 0.1
SEC23B-201ENST00000262544 TMEM2Q9UHN6 1383 aa15.69■□□□□ 0.1
SEC23B-201ENST00000262544 RIMS1Q86UR5 1692 aaKnown RBP15.69■□□□□ 0.1
SEC23B-201ENST00000262544 ANKRD26Q9UPS8 1709 aa15.69■□□□□ 0.1
SEC23B-201ENST00000262544 PRAMEF22A3QJZ6 481 aa15.69■□□□□ 0.1
SEC23B-201ENST00000262544 C9orf78Q9NZ63 289 aaPredicted RBP15.69■□□□□ 0.1
SEC23B-201ENST00000262544 FAM13BQ9NYF5 915 aa15.68■□□□□ 0.1
SEC23B-201ENST00000262544 USP6P35125 1406 aa15.68■□□□□ 0.1
SEC23B-201ENST00000262544 ESCO1Q5FWF5 840 aa15.68■□□□□ 0.1
SEC23B-201ENST00000262544 FLT4P35916 1363 aa15.68■□□□□ 0.1
SEC23B-201ENST00000262544 CRB1P82279 1406 aa15.68■□□□□ 0.1
SEC23B-201ENST00000262544 CWF19L2Q2TBE0 894 aaKnown RBP15.67■□□□□ 0.1
SEC23B-201ENST00000262544 ZSCAN30Q86W11 494 aa15.67■□□□□ 0.1
SEC23B-201ENST00000262544 PLEKHG3A1L390 1219 aa15.67■□□□□ 0.1
SEC23B-201ENST00000262544 SOS1Q07889 1333 aaPredicted RBP15.67■□□□□ 0.1
SEC23B-201ENST00000262544 VPS37CA5D8V6 355 aaPredicted RBP15.67■□□□□ 0.1
SEC23B-201ENST00000262544 PPP6R1Q9UPN7 881 aa15.67■□□□□ 0.1
SEC23B-201ENST00000262544 KIAA0232Q92628 1395 aa15.66■□□□□ 0.1
SEC23B-201ENST00000262544 PPFIA3O75145 1194 aa15.66■□□□□ 0.1
SEC23B-201ENST00000262544 FERMT3Q86UX7 667 aa15.66■□□□□ 0.1
SEC23B-201ENST00000262544 RHPN1Q8TCX5 695 aa15.66■□□□□ 0.1
SEC23B-201ENST00000262544 CNPY2Q9Y2B0 182 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms