RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 TRIM6-TRIM34B2RNG4 842 aa23.64■■□□□ 1.37
SCARB1-201ENST00000261693 FKBP5Q13451 457 aaPredicted RBP23.64■■□□□ 1.37
SCARB1-201ENST00000261693 STK31Q9BXU1 1019 aa23.64■■□□□ 1.37
SCARB1-201ENST00000261693 ESYT1Q9BSJ8 1104 aa23.63■■□□□ 1.37
SCARB1-201ENST00000261693 LRRCC1Q9C099 1032 aa23.63■■□□□ 1.37
SCARB1-201ENST00000261693 PLEKHG3A1L390 1219 aa23.63■■□□□ 1.37
SCARB1-201ENST00000261693 MX1P20591 662 aa23.63■■□□□ 1.37
SCARB1-201ENST00000261693 ANO2Q9NQ90 1003 aa23.62■■□□□ 1.37
SCARB1-201ENST00000261693 TMEM63CQ9P1W3 806 aa23.62■■□□□ 1.37
SCARB1-201ENST00000261693 SYCE3A1L190 88 aa23.61■■□□□ 1.37
SCARB1-201ENST00000261693 MSNP26038 577 aaKnown RBP23.61■■□□□ 1.37
SCARB1-201ENST00000261693 FLIIQ13045 1269 aa23.61■■□□□ 1.37
SCARB1-201ENST00000261693 HSP90AA2PQ14568 343 aaPredicted RBP23.61■■□□□ 1.37
SCARB1-201ENST00000261693 EYA1Q99502 592 aa23.61■■□□□ 1.37
SCARB1-201ENST00000261693 ARHGEF10O15013 1369 aa23.6■■□□□ 1.37
SCARB1-201ENST00000261693 DIP2BQ9P265 1576 aa23.6■■□□□ 1.37
SCARB1-201ENST00000261693 SALL3Q9BXA9 1300 aa23.6■■□□□ 1.37
SCARB1-201ENST00000261693 USP31Q70CQ4 1352 aa23.6■■□□□ 1.37
SCARB1-201ENST00000261693 AMPHP49418 695 aa23.59■■□□□ 1.37
SCARB1-201ENST00000261693 TMEM2Q9UHN6 1383 aa23.59■■□□□ 1.37
SCARB1-201ENST00000261693 FOXD4L6Q3SYB3 417 aaPredicted RBP23.59■■□□□ 1.37
SCARB1-201ENST00000261693 FOXD4L3Q6VB84 417 aaPredicted RBP23.59■■□□□ 1.37
SCARB1-201ENST00000261693 UNC5CLQ8IV45 518 aa23.59■■□□□ 1.37
SCARB1-201ENST00000261693 SLC26A8Q96RN1 970 aa23.59■■□□□ 1.37
SCARB1-201ENST00000261693 NALCNQ8IZF0 1738 aa23.58■■□□□ 1.37
SCARB1-201ENST00000261693 CHMLP26374 656 aa23.58■■□□□ 1.37
SCARB1-201ENST00000261693 KIAA1211Q6ZU35 1233 aa23.58■■□□□ 1.37
SCARB1-201ENST00000261693 LRRFIP2Q9Y608 721 aaKnown RBP23.58■■□□□ 1.37
SCARB1-201ENST00000261693 UPF3BQ9BZI7 483 aaKnown RBP23.58■■□□□ 1.36
SCARB1-201ENST00000261693 ADAMTS13Q76LX8 1427 aa23.57■■□□□ 1.36
SCARB1-201ENST00000261693 MCCP23508 829 aa23.57■■□□□ 1.36
SCARB1-201ENST00000261693 ATP8B2P98198 1209 aa23.57■■□□□ 1.36
SCARB1-201ENST00000261693 TNRQ92752 1358 aa23.56■■□□□ 1.36
SCARB1-201ENST00000261693 CEP170BQ9Y4F5 1589 aaPredicted RBP23.56■■□□□ 1.36
SCARB1-201ENST00000261693 TOPAZ1Q8N9V7 1692 aa23.56■■□□□ 1.36
SCARB1-201ENST00000261693 GNAI3P08754 354 aa23.56■■□□□ 1.36
SCARB1-201ENST00000261693 LTKP29376 864 aa23.56■■□□□ 1.36
SCARB1-201ENST00000261693 IL1RAPL2Q9NP60 686 aa23.56■■□□□ 1.36
SCARB1-201ENST00000261693 CCDC30Q5VVM6 783 aa23.55■■□□□ 1.36
SCARB1-201ENST00000261693 FLT4P35916 1363 aa23.55■■□□□ 1.36
SCARB1-201ENST00000261693 FMN2Q9NZ56 1722 aa23.55■■□□□ 1.36
SCARB1-201ENST00000261693 LRSAM1Q6UWE0 723 aa23.55■■□□□ 1.36
SCARB1-201ENST00000261693 RNF214Q8ND24 703 aa23.54■■□□□ 1.36
SCARB1-201ENST00000261693 IL25Q9H293 177 aa23.54■■□□□ 1.36
SCARB1-201ENST00000261693 TUBGCP6Q96RT7 1819 aa23.54■■□□□ 1.36
SCARB1-201ENST00000261693 BRD1O95696 1058 aa23.54■■□□□ 1.36
SCARB1-201ENST00000261693 NGDNQ8NEJ9 315 aaKnown RBP23.54■■□□□ 1.36
SCARB1-201ENST00000261693 SBNO1A3KN83 1393 aa23.53■■□□□ 1.36
SCARB1-201ENST00000261693 MAP4K4O95819 1239 aaPredicted RBP23.53■■□□□ 1.36
SCARB1-201ENST00000261693 MCM2P49736 904 aa23.53■■□□□ 1.36
SCARB1-201ENST00000261693 NUTM2GQ5VZR2 741 aa23.53■■□□□ 1.36
SCARB1-201ENST00000261693 RRP9O43818 475 aaKnown RBP23.53■■□□□ 1.36
SCARB1-201ENST00000261693 KDRP35968 1356 aa23.52■■□□□ 1.36
SCARB1-201ENST00000261693 CUL4AQ13619 759 aa23.52■■□□□ 1.36
SCARB1-201ENST00000261693 NUTM1Q86Y26 1132 aa23.52■■□□□ 1.36
SCARB1-201ENST00000261693 PDLIM2Q96JY6 352 aa23.52■■□□□ 1.36
SCARB1-201ENST00000261693 IGSF1Q8N6C5 1336 aa23.52■■□□□ 1.36
SCARB1-201ENST00000261693 SSH2Q76I76 1423 aa23.52■■□□□ 1.35
SCARB1-201ENST00000261693 OFD1O75665 1012 aa23.51■■□□□ 1.35
SCARB1-201ENST00000261693 GDPD2Q9HCC8 539 aa23.51■■□□□ 1.35
SCARB1-201ENST00000261693 GNAT3A8MTJ3 354 aa23.51■■□□□ 1.35
SCARB1-201ENST00000261693 USP44Q9H0E7 712 aa23.51■■□□□ 1.35
SCARB1-201ENST00000261693 LTV1Q96GA3 475 aaPredicted RBP23.5■■□□□ 1.35
SCARB1-201ENST00000261693 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.5■■□□□ 1.35
SCARB1-201ENST00000261693 UBR1Q8IWV7 1749 aa23.5■■□□□ 1.35
SCARB1-201ENST00000261693 TPM2P07951 284 aa23.5■■□□□ 1.35
SCARB1-201ENST00000261693 NOL7Q9UMY1 257 aaKnown RBP23.5■■□□□ 1.35
SCARB1-201ENST00000261693 XRN1Q8IZH2 1706 aaKnown RBP23.49■■□□□ 1.35
SCARB1-201ENST00000261693 MBD3O95983 291 aa23.49■■□□□ 1.35
SCARB1-201ENST00000261693 UBTFL1P0CB47 393 aaPredicted RBP23.49■■□□□ 1.35
SCARB1-201ENST00000261693 ANAPC15P60006 121 aa23.49■■□□□ 1.35
SCARB1-201ENST00000261693 IL17REQ8NFR9 667 aa23.49■■□□□ 1.35
SCARB1-201ENST00000261693 STAP2Q9UGK3 403 aa23.49■■□□□ 1.35
SCARB1-201ENST00000261693 TTC21AQ8NDW8 1320 aa23.49■■□□□ 1.35
SCARB1-201ENST00000261693 XPCQ01831 940 aaPredicted RBP23.48■■□□□ 1.35
SCARB1-201ENST00000261693 PHAXQ9H814 394 aaKnown RBP23.48■■□□□ 1.35
SCARB1-201ENST00000261693 PTPRUQ92729 1446 aa23.48■■□□□ 1.35
SCARB1-201ENST00000261693 HS1BP3Q53T59 392 aa23.48■■□□□ 1.35
SCARB1-201ENST00000261693 TCHHQ07283 1943 aa23.48■■□□□ 1.35
SCARB1-201ENST00000261693 FAM208AQ9UK61 1670 aaKnown RBP23.48■■□□□ 1.35
SCARB1-201ENST00000261693 NLRP6P59044 892 aa23.47■■□□□ 1.35
SCARB1-201ENST00000261693 TPRNQ4KMQ1 711 aa23.47■■□□□ 1.35
SCARB1-201ENST00000261693 AMOTL2Q9Y2J4 779 aa23.47■■□□□ 1.35
SCARB1-201ENST00000261693 RGPD8O14715 1765 aaPredicted RBP23.47■■□□□ 1.35
SCARB1-201ENST00000261693 INTS4Q96HW7 963 aaKnown RBP23.47■■□□□ 1.35
SCARB1-201ENST00000261693 SRCIN1Q9C0H9 1055 aa23.47■■□□□ 1.35
SCARB1-201ENST00000261693 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.46■■□□□ 1.35
SCARB1-201ENST00000261693 GADD45BO75293 160 aaPredicted RBP23.46■■□□□ 1.35
SCARB1-201ENST00000261693 SURF6O75683 361 aaKnown RBP23.46■■□□□ 1.35
SCARB1-201ENST00000261693 PLPPR3Q6T4P5 718 aa23.46■■□□□ 1.35
SCARB1-201ENST00000261693 R3HCC1Q9Y3T6 440 aaKnown RBP23.46■■□□□ 1.35
SCARB1-201ENST00000261693 LARP6Q9BRS8 491 aaKnown RBP23.45■■□□□ 1.34
SCARB1-201ENST00000261693 PPP1R42Q7Z4L9 355 aa23.45■■□□□ 1.34
SCARB1-201ENST00000261693 USHBP1Q8N6Y0 703 aa23.45■■□□□ 1.34
SCARB1-201ENST00000261693 SOS1Q07889 1333 aaPredicted RBP23.44■■□□□ 1.34
SCARB1-201ENST00000261693 HDGFL1Q5TGJ6 251 aa23.44■■□□□ 1.34
SCARB1-201ENST00000261693 HTATSF1O43719 755 aaKnown RBP23.44■■□□□ 1.34
SCARB1-201ENST00000261693 TAF7Q15545 349 aaPredicted RBP23.44■■□□□ 1.34
SCARB1-201ENST00000261693 PLEKHG1Q9ULL1 1385 aa23.43■■□□□ 1.34
SCARB1-201ENST00000261693 EIF2S2P20042 333 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms