RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 LRRCC1Q9C099 1032 aa7.65□□□□□ -1.18
BRIP1-201ENST00000259008 HYPKQ9NX55 129 aa7.65□□□□□ -1.18
BRIP1-201ENST00000259008 NOP58Q9Y2X3 529 aaKnown RBP7.65□□□□□ -1.18
BRIP1-201ENST00000259008 MYO5CQ9NQX4 1742 aa7.65□□□□□ -1.18
BRIP1-201ENST00000259008 PCDH11XQ9BZA7 1347 aa7.65□□□□□ -1.18
BRIP1-201ENST00000259008 PCDH11YQ9BZA8 1340 aa7.65□□□□□ -1.18
BRIP1-201ENST00000259008 AIDAQ96BJ3 306 aa7.65□□□□□ -1.18
BRIP1-201ENST00000259008 PCMTD1Q96MG8 357 aaPredicted RBP7.65□□□□□ -1.18
BRIP1-201ENST00000259008 CDC5LQ99459 802 aaKnown RBP7.65□□□□□ -1.19
BRIP1-201ENST00000259008 WDR97A6NE52 1622 aa7.65□□□□□ -1.19
BRIP1-201ENST00000259008 XBP1P17861 261 aa7.65□□□□□ -1.19
BRIP1-201ENST00000259008 NUTM1Q86Y26 1132 aa7.65□□□□□ -1.19
BRIP1-201ENST00000259008 TRPM2O94759 1503 aa7.65□□□□□ -1.19
BRIP1-201ENST00000259008 CCDC69A6NI79 296 aa7.64□□□□□ -1.19
BRIP1-201ENST00000259008 CWC25Q9NXE8 425 aaPredicted RBP7.64□□□□□ -1.19
BRIP1-201ENST00000259008 TMEM94Q12767 1356 aa7.64□□□□□ -1.19
BRIP1-201ENST00000259008 NPHP4O75161 1426 aaPredicted RBP7.64□□□□□ -1.19
BRIP1-201ENST00000259008 VPS37CA5D8V6 355 aaPredicted RBP7.64□□□□□ -1.19
BRIP1-201ENST00000259008 MINDY4BA8MYZ0 360 aa7.64□□□□□ -1.19
BRIP1-201ENST00000259008 ZNF526Q8TF50 670 aaPredicted RBP7.64□□□□□ -1.19
BRIP1-201ENST00000259008 VEZTQ9HBM0 779 aa7.64□□□□□ -1.19
BRIP1-201ENST00000259008 TRIM37O94972 964 aa7.64□□□□□ -1.19
BRIP1-201ENST00000259008 CCDC47Q96A33 483 aaKnown RBP7.64□□□□□ -1.19
BRIP1-201ENST00000259008 TRPC5Q9UL62 973 aaPredicted RBP7.64□□□□□ -1.19
BRIP1-201ENST00000259008 TPM2P07951 284 aa7.64□□□□□ -1.19
BRIP1-201ENST00000259008 AKAP2Q9Y2D5 859 aa7.64□□□□□ -1.19
BRIP1-201ENST00000259008 CCDC152Q4G0S7 254 aa7.63□□□□□ -1.19
BRIP1-201ENST00000259008 FEZ1Q99689 392 aa7.63□□□□□ -1.19
BRIP1-201ENST00000259008 DBF4Q9UBU7 674 aaPredicted RBP7.63□□□□□ -1.19
BRIP1-201ENST00000259008 YTHDC2Q9H6S0 1430 aaKnown RBP7.63□□□□□ -1.19
BRIP1-201ENST00000259008 AEBP1Q8IUX7 1158 aa7.63□□□□□ -1.19
BRIP1-201ENST00000259008 MKNK2Q9HBH9 465 aa7.63□□□□□ -1.19
BRIP1-201ENST00000259008 HDAC9Q9UKV0 1011 aa7.63□□□□□ -1.19
BRIP1-201ENST00000259008 PRIM1P49642 420 aaKnown RBP7.63□□□□□ -1.19
BRIP1-201ENST00000259008 EAPPQ56P03 285 aaPredicted RBP7.63□□□□□ -1.19
BRIP1-201ENST00000259008 WDR63Q8IWG1 891 aa7.63□□□□□ -1.19
BRIP1-201ENST00000259008 CCDC24Q8N4L8 307 aa7.63□□□□□ -1.19
BRIP1-201ENST00000259008 NLRP3Q96P20 1036 aa7.63□□□□□ -1.19
BRIP1-201ENST00000259008 IFT57Q9NWB7 429 aa7.63□□□□□ -1.19
BRIP1-201ENST00000259008 MAP3K1Q13233 1512 aa7.63□□□□□ -1.19
BRIP1-201ENST00000259008 MAST1Q9Y2H9 1570 aa7.63□□□□□ -1.19
BRIP1-201ENST00000259008 ZNF76P36508 570 aa7.63□□□□□ -1.19
BRIP1-201ENST00000259008 SYAP1Q96A49 352 aaPredicted RBP7.63□□□□□ -1.19
BRIP1-201ENST00000259008 IQSEC3Q9UPP2 1182 aaPredicted RBP7.63□□□□□ -1.19
BRIP1-201ENST00000259008 STK3Q13188 491 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 UTP14AQ9BVJ6 771 aaKnown RBP7.62□□□□□ -1.19
BRIP1-201ENST00000259008 TMEM2Q9UHN6 1383 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 ERCC6L2Q5T890 1561 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 HOXC9P31274 260 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 ANKRD18AQ8IVF6 992 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 OGFOD1Q8N543 542 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 DNAAF4Q8WXU2 420 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 CDK5RAP3Q96JB5 506 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 UGGT1Q9NYU2 1555 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 NYXQ9GZU5 481 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 BCS1LQ9Y276 419 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.62□□□□□ -1.19
BRIP1-201ENST00000259008 HIP1O00291 1037 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 AKAP4Q5JQC9 854 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 SOGA3Q5TF21 947 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 LDHAL6AQ6ZMR3 332 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 UBE3BQ7Z3V4 1068 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 NF2P35240 595 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 EIF4A2Q14240 407 aaKnown RBP7.62□□□□□ -1.19
BRIP1-201ENST00000259008 CDCA7Q9BWT1 371 aaPredicted RBP7.62□□□□□ -1.19
BRIP1-201ENST00000259008 CHPF2Q9P2E5 772 aa7.62□□□□□ -1.19
BRIP1-201ENST00000259008 SAMD9Q5K651 1589 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 SPDYE4A6NLX3 237 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 PSMA5P28066 241 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 PICALMQ13492 652 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 CCDC96Q2M329 555 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 TPTE2Q6XPS3 522 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 SLF2Q8IX21 1173 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 ARHGEF10O15013 1369 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 UBAC1Q9BSL1 405 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 SMC3Q9UQE7 1217 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 KRT18P05783 430 aaKnown RBP7.61□□□□□ -1.19
BRIP1-201ENST00000259008 SCLT1Q96NL6 688 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 JAG2Q9Y219 1238 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 XAGE3Q8WTP9 111 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 RBM17Q96I25 401 aaKnown RBP7.61□□□□□ -1.19
BRIP1-201ENST00000259008 PTPRKQ15262 1439 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 CWC27Q6UX04 472 aaKnown RBP7.61□□□□□ -1.19
BRIP1-201ENST00000259008 VTI1AQ96AJ9 217 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 BEGAINQ9BUH8 593 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 CCDC8Q9H0W5 538 aaPredicted RBP7.61□□□□□ -1.19
BRIP1-201ENST00000259008 EXOC6BQ9Y2D4 811 aa7.61□□□□□ -1.19
BRIP1-201ENST00000259008 CDC45O75419 566 aa7.6□□□□□ -1.19
BRIP1-201ENST00000259008 MATR3P43243 847 aaKnown RBP eCLIP7.6□□□□□ -1.199e-6■■□□□ 13
BRIP1-201ENST00000259008 ARHGAP27Q6ZUM4 889 aa7.6□□□□□ -1.19
BRIP1-201ENST00000259008 CNBD1Q8NA66 436 aa7.6□□□□□ -1.19
BRIP1-201ENST00000259008 BIN2Q9UBW5 565 aaPredicted RBP7.6□□□□□ -1.19
BRIP1-201ENST00000259008 NSFL1CQ9UNZ2 370 aaKnown RBP7.6□□□□□ -1.19
BRIP1-201ENST00000259008 ATF7IPQ6VMQ6 1270 aa7.6□□□□□ -1.19
BRIP1-201ENST00000259008 ANKRD36BQ8N2N9 1353 aa7.6□□□□□ -1.19
BRIP1-201ENST00000259008 ANKRD13DQ6ZTN6 518 aa7.6□□□□□ -1.19
BRIP1-201ENST00000259008 COPS6Q7L5N1 327 aa7.6□□□□□ -1.19
BRIP1-201ENST00000259008 BOLA2Q9H3K6 86 aa7.6□□□□□ -1.19
BRIP1-201ENST00000259008 ZHX3Q9H4I2 956 aa7.6□□□□□ -1.19
BRIP1-201ENST00000259008 CCDC87Q9NVE4 849 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms