RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 LEKR1Q6ZMV7 388 aa12.87□□□□□ -0.35
URB2-201ENST00000258243 PAXIP1Q6ZW49 1069 aaPredicted RBP12.87□□□□□ -0.35
URB2-201ENST00000258243 SMARCC1Q92922 1105 aaPredicted RBP12.87□□□□□ -0.35
URB2-201ENST00000258243 THUMPD2Q9BTF0 503 aaKnown RBP12.87□□□□□ -0.35
URB2-201ENST00000258243 GOLGA6L7A0A1B0GV03 622 aa12.87□□□□□ -0.35
URB2-201ENST00000258243 SOGA3Q5TF21 947 aa12.87□□□□□ -0.35
URB2-201ENST00000258243 GIMAP7Q8NHV1 300 aa12.87□□□□□ -0.35
URB2-201ENST00000258243 GRPEL1Q9HAV7 217 aa12.87□□□□□ -0.35
URB2-201ENST00000258243 ABCF2Q9UG63 623 aa12.87□□□□□ -0.35
URB2-201ENST00000258243 TTLL12Q14166 644 aaPredicted RBP12.87□□□□□ -0.35
URB2-201ENST00000258243 IDH1O75874 414 aaKnown RBP12.87□□□□□ -0.35
URB2-201ENST00000258243 ANKRD18BA2A2Z9 1011 aa12.87□□□□□ -0.35
URB2-201ENST00000258243 IPO7O95373 1038 aaKnown RBP12.87□□□□□ -0.35
URB2-201ENST00000258243 PPP1R42Q7Z4L9 355 aa12.87□□□□□ -0.35
URB2-201ENST00000258243 CTNNA3Q9UI47 895 aa12.87□□□□□ -0.35
URB2-201ENST00000258243 PPIP5K1Q6PFW1 1433 aa12.86□□□□□ -0.35
URB2-201ENST00000258243 MVPQ14764 893 aaKnown RBP12.86□□□□□ -0.35
URB2-201ENST00000258243 NBPF14Q5TI25 921 aa12.86□□□□□ -0.35
URB2-201ENST00000258243 BCCIPQ9P287 314 aaKnown RBP eCLIP12.86□□□□□ -0.35
URB2-201ENST00000258243 ERCC4Q92889 916 aaPredicted RBP12.86□□□□□ -0.35
URB2-201ENST00000258243 ZNF622Q969S3 477 aaKnown RBP eCLIP12.86□□□□□ -0.35
URB2-201ENST00000258243 ZNF287Q9HBT7 754 aa12.86□□□□□ -0.35
URB2-201ENST00000258243 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
URB2-201ENST00000258243 ATP10AO60312 1499 aa12.86□□□□□ -0.35
URB2-201ENST00000258243 SLC5A1P13866 664 aa12.86□□□□□ -0.35
URB2-201ENST00000258243 TRIM22Q8IYM9 498 aa12.86□□□□□ -0.35
URB2-201ENST00000258243 RRP9O43818 475 aaKnown RBP12.86□□□□□ -0.35
URB2-201ENST00000258243 MAP4K4O95819 1239 aaPredicted RBP12.86□□□□□ -0.35
URB2-201ENST00000258243 CRACR2BQ8N4Y2 399 aaPredicted RBP12.86□□□□□ -0.35
URB2-201ENST00000258243 MPHOSPH10O00566 681 aaKnown RBP12.85□□□□□ -0.35
URB2-201ENST00000258243 SLF2Q8IX21 1173 aa12.85□□□□□ -0.35
URB2-201ENST00000258243 AIDAQ96BJ3 306 aa12.85□□□□□ -0.35
URB2-201ENST00000258243 ACSBG1Q96GR2 724 aa12.85□□□□□ -0.35
URB2-201ENST00000258243 NUP160Q12769 1436 aa12.85□□□□□ -0.35
URB2-201ENST00000258243 ANKRD36BQ8N2N9 1353 aa12.85□□□□□ -0.35
URB2-201ENST00000258243 USP5P45974 858 aa12.85□□□□□ -0.35
URB2-201ENST00000258243 DDX46Q7L014 1031 aaKnown RBP12.85□□□□□ -0.35
URB2-201ENST00000258243 DZIP1Q86YF9 867 aaKnown RBP12.85□□□□□ -0.35
URB2-201ENST00000258243 RPAP2Q8IXW5 612 aaPredicted RBP12.85□□□□□ -0.35
URB2-201ENST00000258243 TXLNAP40222 546 aa12.85□□□□□ -0.35
URB2-201ENST00000258243 UBAC1Q9BSL1 405 aa12.85□□□□□ -0.35
URB2-201ENST00000258243 ESPNB1AK53 854 aa12.85□□□□□ -0.35
URB2-201ENST00000258243 C6orf229H3BNL8 230 aa12.85□□□□□ -0.35
URB2-201ENST00000258243 GPTP24298 496 aa12.85□□□□□ -0.35
URB2-201ENST00000258243 FBXO3Q9UK99 471 aa12.85□□□□□ -0.35
URB2-201ENST00000258243 EPS15P42566 896 aa12.84□□□□□ -0.35
URB2-201ENST00000258243 NUP133Q8WUM0 1156 aa12.84□□□□□ -0.35
URB2-201ENST00000258243 ZBTB3Q9H5J0 574 aa12.84□□□□□ -0.35
URB2-201ENST00000258243 CDC5LQ99459 802 aaKnown RBP12.84□□□□□ -0.35
URB2-201ENST00000258243 POLR3DP05423 398 aaPredicted RBP12.84□□□□□ -0.35
URB2-201ENST00000258243 KRT18P05783 430 aaKnown RBP12.84□□□□□ -0.35
URB2-201ENST00000258243 ATP2B1P20020 1258 aa12.84□□□□□ -0.35
URB2-201ENST00000258243 MCM4P33991 863 aa12.84□□□□□ -0.35
URB2-201ENST00000258243 ATP6V1AP38606 617 aa12.84□□□□□ -0.35
URB2-201ENST00000258243 SNRPA1P09661 255 aaKnown RBP12.83□□□□□ -0.35
URB2-201ENST00000258243 POLD1P28340 1107 aa12.83□□□□□ -0.35
URB2-201ENST00000258243 DNAAF4Q8WXU2 420 aa12.83□□□□□ -0.35
URB2-201ENST00000258243 SASS6Q6UVJ0 657 aa12.83□□□□□ -0.36
URB2-201ENST00000258243 ANKRD1Q15327 319 aa12.83□□□□□ -0.36
URB2-201ENST00000258243 CYP46A1Q9Y6A2 500 aa12.83□□□□□ -0.36
URB2-201ENST00000258243 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.82□□□□□ -0.36
URB2-201ENST00000258243 PBRM1Q86U86 1689 aa12.82□□□□□ -0.36
URB2-201ENST00000258243 IL2RBP14784 551 aa12.82□□□□□ -0.36
URB2-201ENST00000258243 MCM2P49736 904 aa12.82□□□□□ -0.36
URB2-201ENST00000258243 NBPF6Q5VWK0 638 aa12.82□□□□□ -0.36
URB2-201ENST00000258243 NBPF5PQ86XG9 351 aaPredicted RBP12.82□□□□□ -0.36
URB2-201ENST00000258243 NBPF4Q96M43 638 aa12.82□□□□□ -0.36
URB2-201ENST00000258243 RAB11FIP3O75154 756 aa12.82□□□□□ -0.36
URB2-201ENST00000258243 IL1RAPL2Q9NP60 686 aa12.82□□□□□ -0.36
URB2-201ENST00000258243 RPRD2Q5VT52 1461 aaKnown RBP12.82□□□□□ -0.36
URB2-201ENST00000258243 PRPF40AO75400 957 aaKnown RBP12.82□□□□□ -0.36
URB2-201ENST00000258243 OLFM4Q6UX06 510 aa12.82□□□□□ -0.36
URB2-201ENST00000258243 ALDH1L2Q3SY69 923 aa12.82□□□□□ -0.36
URB2-201ENST00000258243 CAGE1Q8TC20 777 aa12.82□□□□□ -0.36
URB2-201ENST00000258243 PDCP20941 246 aa12.81□□□□□ -0.36
URB2-201ENST00000258243 CABLES1Q8TDN4 633 aa12.81□□□□□ -0.36
URB2-201ENST00000258243 CWC25Q9NXE8 425 aaPredicted RBP12.81□□□□□ -0.36
URB2-201ENST00000258243 KIAA0754O94854 1291 aa12.81□□□□□ -0.36
URB2-201ENST00000258243 MBD3O95983 291 aa12.81□□□□□ -0.36
URB2-201ENST00000258243 KIF1BPQ96EK5 621 aa12.81□□□□□ -0.36
URB2-201ENST00000258243 TBX22Q9Y458 520 aa12.81□□□□□ -0.36
URB2-201ENST00000258243 NEK4P51957 841 aa12.81□□□□□ -0.36
URB2-201ENST00000258243 SKAP1Q86WV1 359 aa12.81□□□□□ -0.36
URB2-201ENST00000258243 ZNF396Q96N95 335 aaPredicted RBP12.8□□□□□ -0.36
URB2-201ENST00000258243 SLFN5Q08AF3 891 aa12.8□□□□□ -0.36
URB2-201ENST00000258243 MAP3K12Q12852 859 aa12.8□□□□□ -0.36
URB2-201ENST00000258243 TRPM2O94759 1503 aa12.8□□□□□ -0.36
URB2-201ENST00000258243 CDKL5O76039 1030 aa12.8□□□□□ -0.36
URB2-201ENST00000258243 KCNA6P17658 529 aa12.8□□□□□ -0.36
URB2-201ENST00000258243 IMMTQ16891 758 aaKnown RBP12.8□□□□□ -0.36
URB2-201ENST00000258243 CT47A1Q5JQC4 288 aaPredicted RBP12.8□□□□□ -0.36
URB2-201ENST00000258243 HOMER1Q86YM7 354 aa12.8□□□□□ -0.36
URB2-201ENST00000258243 SETDB2Q96T68 719 aa12.8□□□□□ -0.36
URB2-201ENST00000258243 CEP170Q5SW79 1584 aa12.79□□□□□ -0.36
URB2-201ENST00000258243 CHD1LQ86WJ1 897 aa12.79□□□□□ -0.36
URB2-201ENST00000258243 HOMEZQ8IX15 550 aa12.79□□□□□ -0.36
URB2-201ENST00000258243 ZNF76P36508 570 aa12.79□□□□□ -0.36
URB2-201ENST00000258243 HMGN5P82970 282 aaKnown RBP12.79□□□□□ -0.36
URB2-201ENST00000258243 MNS1Q8NEH6 495 aa12.79□□□□□ -0.36
URB2-201ENST00000258243 TSPY26PQ9H489 355 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms