RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 GLIPR1L2Q4G1C9 344 aa20.76■□□□□ 0.91
CDK4-201ENST00000257904 RGPD1P0DJD0 1748 aa20.75■□□□□ 0.91
CDK4-201ENST00000257904 PLEKHG3A1L390 1219 aa20.74■□□□□ 0.91
CDK4-201ENST00000257904 KCNA6P17658 529 aa20.74■□□□□ 0.91
CDK4-201ENST00000257904 PRIM1P49642 420 aaKnown RBP20.74■□□□□ 0.91
CDK4-201ENST00000257904 PDLIM2Q96JY6 352 aa20.74■□□□□ 0.91
CDK4-201ENST00000257904 OVOS2A0A0J9YW53 1432 aa20.74■□□□□ 0.91
CDK4-201ENST00000257904 OVOS2Q6IE36 1432 aa20.74■□□□□ 0.91
CDK4-201ENST00000257904 OFD1O75665 1012 aa20.73■□□□□ 0.91
CDK4-201ENST00000257904 KIAA1211Q6ZU35 1233 aa20.73■□□□□ 0.91
CDK4-201ENST00000257904 RBM27Q9P2N5 1060 aaKnown RBP20.73■□□□□ 0.91
CDK4-201ENST00000257904 TTC21BQ7Z4L5 1316 aa20.73■□□□□ 0.91
CDK4-201ENST00000257904 CCT4P50991 539 aaKnown RBP20.73■□□□□ 0.91
CDK4-201ENST00000257904 PEAK1Q9H792 1746 aa20.72■□□□□ 0.91
CDK4-201ENST00000257904 NEK4P51957 841 aa20.71■□□□□ 0.91
CDK4-201ENST00000257904 HSP90AB2PQ58FF8 381 aa20.71■□□□□ 0.91
CDK4-201ENST00000257904 SLC4A10Q6U841 1118 aa20.71■□□□□ 0.91
CDK4-201ENST00000257904 G2E3Q7L622 706 aa20.71■□□□□ 0.91
CDK4-201ENST00000257904 TMX3Q96JJ7 454 aa20.71■□□□□ 0.91
CDK4-201ENST00000257904 TMEM63CQ9P1W3 806 aa20.71■□□□□ 0.91
CDK4-201ENST00000257904 F6X3S4 739 aa20.7■□□□□ 0.9
CDK4-201ENST00000257904 MCM2P49736 904 aa20.7■□□□□ 0.9
CDK4-201ENST00000257904 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.7■□□□□ 0.9
CDK4-201ENST00000257904 NOL7Q9UMY1 257 aaKnown RBP20.7■□□□□ 0.9
CDK4-201ENST00000257904 SALL3Q9BXA9 1300 aa20.7■□□□□ 0.9
CDK4-201ENST00000257904 NALCNQ8IZF0 1738 aa20.7■□□□□ 0.9
CDK4-201ENST00000257904 CHD2O14647 1828 aaKnown RBP20.7■□□□□ 0.9
CDK4-201ENST00000257904 LRSAM1Q6UWE0 723 aa20.69■□□□□ 0.9
CDK4-201ENST00000257904 CHAMP1Q96JM3 812 aa20.69■□□□□ 0.9
CDK4-201ENST00000257904 MIS18AQ9NYP9 233 aa20.69■□□□□ 0.9
CDK4-201ENST00000257904 USP6P35125 1406 aa20.69■□□□□ 0.9
CDK4-201ENST00000257904 ESYT1Q9BSJ8 1104 aa20.69■□□□□ 0.9
CDK4-201ENST00000257904 NPHP4O75161 1426 aaPredicted RBP20.68■□□□□ 0.9
CDK4-201ENST00000257904 GNAI2P04899 355 aa20.68■□□□□ 0.9
CDK4-201ENST00000257904 TUBGCP6Q96RT7 1819 aa20.68■□□□□ 0.9
CDK4-201ENST00000257904 ARHGEF10O15013 1369 aa20.68■□□□□ 0.9
CDK4-201ENST00000257904 MBD3O95983 291 aa20.68■□□□□ 0.9
CDK4-201ENST00000257904 TSPYL4Q9UJ04 414 aa20.68■□□□□ 0.9
CDK4-201ENST00000257904 EXOC6BQ9Y2D4 811 aa20.68■□□□□ 0.9
CDK4-201ENST00000257904 BRD1O95696 1058 aa20.67■□□□□ 0.9
CDK4-201ENST00000257904 CUL4AQ13619 759 aa20.67■□□□□ 0.9
CDK4-201ENST00000257904 NSFL1CQ9UNZ2 370 aaKnown RBP20.67■□□□□ 0.9
CDK4-201ENST00000257904 RGPD8O14715 1765 aaPredicted RBP20.67■□□□□ 0.9
CDK4-201ENST00000257904 USP31Q70CQ4 1352 aa20.67■□□□□ 0.9
CDK4-201ENST00000257904 SYCE3A1L190 88 aa20.66■□□□□ 0.9
CDK4-201ENST00000257904 ZNF500O60304 480 aaPredicted RBP20.66■□□□□ 0.9
CDK4-201ENST00000257904 TSHZ3Q63HK5 1081 aa20.66■□□□□ 0.9
CDK4-201ENST00000257904 MCCP23508 829 aa20.66■□□□□ 0.9
CDK4-201ENST00000257904 TERF1P54274 439 aa20.66■□□□□ 0.9
CDK4-201ENST00000257904 LRRCC1Q9C099 1032 aa20.66■□□□□ 0.9
CDK4-201ENST00000257904 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.66■□□□□ 0.9
CDK4-201ENST00000257904 MAP3K19Q56UN5 1328 aa20.65■□□□□ 0.9
CDK4-201ENST00000257904 FOXO3O43524 673 aa20.65■□□□□ 0.9
CDK4-201ENST00000257904 MX1P20591 662 aa20.65■□□□□ 0.9
CDK4-201ENST00000257904 ANAPC15P60006 121 aa20.65■□□□□ 0.9
CDK4-201ENST00000257904 MTHFSDQ2M296 383 aaKnown RBP20.65■□□□□ 0.9
CDK4-201ENST00000257904 RTF1Q92541 710 aaKnown RBP20.65■□□□□ 0.9
CDK4-201ENST00000257904 FOXD4L5Q5VV16 416 aaPredicted RBP20.65■□□□□ 0.9
CDK4-201ENST00000257904 FOXD4L4Q8WXT5 416 aaPredicted RBP20.65■□□□□ 0.9
CDK4-201ENST00000257904 PALD1Q9ULE6 856 aa20.65■□□□□ 0.9
CDK4-201ENST00000257904 NGDNQ8NEJ9 315 aaKnown RBP20.64■□□□□ 0.89
CDK4-201ENST00000257904 INTS4Q96HW7 963 aaKnown RBP20.64■□□□□ 0.89
CDK4-201ENST00000257904 SSH2Q76I76 1423 aa20.63■□□□□ 0.89
CDK4-201ENST00000257904 CHMLP26374 656 aa20.63■□□□□ 0.89
CDK4-201ENST00000257904 IL17RAQ96F46 866 aa20.62■□□□□ 0.89
CDK4-201ENST00000257904 STK31Q9BXU1 1019 aa20.62■□□□□ 0.89
CDK4-201ENST00000257904 ZKSCAN5Q9Y2L8 839 aa20.62■□□□□ 0.89
CDK4-201ENST00000257904 GNAI3P08754 354 aa20.62■□□□□ 0.89
CDK4-201ENST00000257904 ANO2Q9NQ90 1003 aa20.62■□□□□ 0.89
CDK4-201ENST00000257904 PNMA6EA0A0J9YXQ4 647 aa20.61■□□□□ 0.89
CDK4-201ENST00000257904 ATP8B2P98198 1209 aa20.61■□□□□ 0.89
CDK4-201ENST00000257904 STAP2Q9UGK3 403 aa20.61■□□□□ 0.89
CDK4-201ENST00000257904 KDRP35968 1356 aa20.61■□□□□ 0.89
CDK4-201ENST00000257904 ANKARQ7Z5J8 1434 aa20.61■□□□□ 0.89
CDK4-201ENST00000257904 FMN2Q9NZ56 1722 aa20.61■□□□□ 0.89
CDK4-201ENST00000257904 MCM5P33992 734 aa20.6■□□□□ 0.89
CDK4-201ENST00000257904 TTC21AQ8NDW8 1320 aa20.6■□□□□ 0.89
CDK4-201ENST00000257904 TRIM6-TRIM34B2RNG4 842 aa20.6■□□□□ 0.89
CDK4-201ENST00000257904 SOX12O15370 315 aa20.6■□□□□ 0.89
CDK4-201ENST00000257904 FLIIQ13045 1269 aa20.6■□□□□ 0.89
CDK4-201ENST00000257904 RILPL2Q969X0 211 aa20.6■□□□□ 0.89
CDK4-201ENST00000257904 PDCL3Q9H2J4 239 aa20.6■□□□□ 0.89
CDK4-201ENST00000257904 FAM208AQ9UK61 1670 aaKnown RBP20.59■□□□□ 0.89
CDK4-201ENST00000257904 SRCIN1Q9C0H9 1055 aa20.59■□□□□ 0.89
CDK4-201ENST00000257904 FKBP5Q13451 457 aaPredicted RBP20.58■□□□□ 0.89
CDK4-201ENST00000257904 CCDC39Q9UFE4 941 aa20.58■□□□□ 0.89
CDK4-201ENST00000257904 XPCQ01831 940 aaPredicted RBP20.58■□□□□ 0.88
CDK4-201ENST00000257904 NOL8Q76FK4 1167 aaKnown RBP20.58■□□□□ 0.88
CDK4-201ENST00000257904 R3HCC1Q9Y3T6 440 aaKnown RBP20.58■□□□□ 0.88
CDK4-201ENST00000257904 SBNO1A3KN83 1393 aa20.57■□□□□ 0.88
CDK4-201ENST00000257904 FLT4P35916 1363 aa20.57■□□□□ 0.88
CDK4-201ENST00000257904 CCDC30Q5VVM6 783 aa20.57■□□□□ 0.88
CDK4-201ENST00000257904 LRRC37A3O60309 1634 aa20.57■□□□□ 0.88
CDK4-201ENST00000257904 RNF214Q8ND24 703 aa20.57■□□□□ 0.88
CDK4-201ENST00000257904 SYAP1Q96A49 352 aaPredicted RBP20.57■□□□□ 0.88
CDK4-201ENST00000257904 AOX1Q06278 1338 aa20.56■□□□□ 0.88
CDK4-201ENST00000257904 UNC5CLQ8IV45 518 aa20.56■□□□□ 0.88
CDK4-201ENST00000257904 VSIG10Q8N0Z9 540 aa20.56■□□□□ 0.88
CDK4-201ENST00000257904 RBM33Q96EV2 1170 aaKnown RBP20.56■□□□□ 0.88
CDK4-201ENST00000257904 TSPY26PQ9H489 355 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms