RNA–Protein interactions for RNA: ENST00000257075.9

PUM1-201, Transcript of pumilio RNA binding family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PUM1, Length 5,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-201ENST00000257075 ZMYM3Q14202 1370 aa12.61□□□□□ -0.39
PUM1-201ENST00000257075 SYCP1Q15431 976 aa12.61□□□□□ -0.39
PUM1-201ENST00000257075 DNAAF4Q8WXU2 420 aa12.61□□□□□ -0.39
PUM1-201ENST00000257075 NLRP3Q96P20 1036 aa12.61□□□□□ -0.39
PUM1-201ENST00000257075 BMP2KQ9NSY1 1161 aaPredicted RBP12.61□□□□□ -0.39
PUM1-201ENST00000257075 CWC25Q9NXE8 425 aaPredicted RBP12.61□□□□□ -0.39
PUM1-201ENST00000257075 MAP4K4O95819 1239 aaPredicted RBP12.61□□□□□ -0.39
PUM1-201ENST00000257075 NEK4P51957 841 aa12.61□□□□□ -0.39
PUM1-201ENST00000257075 IMMTQ16891 758 aaKnown RBP12.61□□□□□ -0.39
PUM1-201ENST00000257075 SEC63Q9UGP8 760 aaKnown RBP12.61□□□□□ -0.39
PUM1-201ENST00000257075 LDHAL6AQ6ZMR3 332 aa12.6□□□□□ -0.39
PUM1-201ENST00000257075 PDCL3Q9H2J4 239 aa12.6□□□□□ -0.39
PUM1-201ENST00000257075 MCM2P49736 904 aa12.6□□□□□ -0.39
PUM1-201ENST00000257075 CCDC152Q4G0S7 254 aa12.6□□□□□ -0.39
PUM1-201ENST00000257075 SPTY2D1Q68D10 685 aaPredicted RBP12.6□□□□□ -0.39
PUM1-201ENST00000257075 ZNF396Q96N95 335 aaPredicted RBP12.6□□□□□ -0.39
PUM1-201ENST00000257075 CDCA7Q9BWT1 371 aaPredicted RBP12.6□□□□□ -0.39
PUM1-201ENST00000257075 BAG3O95817 575 aa12.6□□□□□ -0.39
PUM1-201ENST00000257075 BAG6P46379 1132 aa12.6□□□□□ -0.39
PUM1-201ENST00000257075 STK38Q15208 465 aa12.6□□□□□ -0.39
PUM1-201ENST00000257075 CCDC96Q2M329 555 aa12.6□□□□□ -0.39
PUM1-201ENST00000257075 KIF1BPQ96EK5 621 aa12.59□□□□□ -0.39
PUM1-201ENST00000257075 HLA-DOAP06340 250 aa12.59□□□□□ -0.39
PUM1-201ENST00000257075 NAPBQ9H115 298 aa12.59□□□□□ -0.39
PUM1-201ENST00000257075 BTG4Q9NY30 223 aa12.59□□□□□ -0.39
PUM1-201ENST00000257075 MATR3P43243 847 aaKnown RBP eCLIP12.59□□□□□ -0.391e-6■■■□□ 14.6
PUM1-201ENST00000257075 WWC3Q9ULE0 1092 aa12.59□□□□□ -0.39
PUM1-201ENST00000257075 SSBP05455 408 aaKnown RBP eCLIP12.58□□□□□ -0.393e-7■□□□□ 8.1
PUM1-201ENST00000257075 LMOD1P29536 600 aaPredicted RBP12.58□□□□□ -0.39
PUM1-201ENST00000257075 RDXP35241 583 aaKnown RBP12.58□□□□□ -0.39
PUM1-201ENST00000257075 NAT10Q9H0A0 1025 aaKnown RBP12.58□□□□□ -0.39
PUM1-201ENST00000257075 ATP10BO94823 1461 aa12.58□□□□□ -0.4
PUM1-201ENST00000257075 TRIM21P19474 475 aaKnown RBP12.58□□□□□ -0.4
PUM1-201ENST00000257075 KRT32Q14532 448 aa12.58□□□□□ -0.4
PUM1-201ENST00000257075 MAGEC2Q9UBF1 373 aaPredicted RBP12.58□□□□□ -0.4
PUM1-201ENST00000257075 KCNA6P17658 529 aa12.58□□□□□ -0.4
PUM1-201ENST00000257075 TPTE2Q6XPS3 522 aa12.58□□□□□ -0.4
PUM1-201ENST00000257075 NYXQ9GZU5 481 aa12.58□□□□□ -0.4
PUM1-201ENST00000257075 TBX22Q9Y458 520 aa12.58□□□□□ -0.4
PUM1-201ENST00000257075 PPP4R3AQ6IN85 833 aa12.58□□□□□ -0.4
PUM1-201ENST00000257075 PIBF1Q8WXW3 757 aa12.58□□□□□ -0.4
PUM1-201ENST00000257075 CUL5Q93034 780 aa12.58□□□□□ -0.4
PUM1-201ENST00000257075 PCF11O94913 1555 aaKnown RBP12.58□□□□□ -0.4
PUM1-201ENST00000257075 BLOC1S2Q6QNY1 142 aa12.57□□□□□ -0.4
PUM1-201ENST00000257075 SPDYE4A6NLX3 237 aa12.57□□□□□ -0.4
PUM1-201ENST00000257075 PIP4K2AP48426 406 aaPredicted RBP12.57□□□□□ -0.4
PUM1-201ENST00000257075 ANKRD18AQ8IVF6 992 aa12.57□□□□□ -0.4
PUM1-201ENST00000257075 CHMP5Q9NZZ3 219 aa12.57□□□□□ -0.4
PUM1-201ENST00000257075 ABCC10Q5T3U5 1492 aa12.57□□□□□ -0.4
PUM1-201ENST00000257075 ABCC11Q96J66 1382 aa12.57□□□□□ -0.4
PUM1-201ENST00000257075 RAB11FIP3O75154 756 aa12.57□□□□□ -0.4
PUM1-201ENST00000257075 WASF1Q92558 559 aa12.57□□□□□ -0.4
PUM1-201ENST00000257075 ATP5J2-PTCD1G3V325 749 aa12.57□□□□□ -0.4
PUM1-201ENST00000257075 MPHOSPH6Q99547 160 aaKnown RBP12.57□□□□□ -0.4
PUM1-201ENST00000257075 PDZRN3Q9UPQ7 1066 aa12.57□□□□□ -0.4
PUM1-201ENST00000257075 KINO60870 393 aaKnown RBP12.56□□□□□ -0.4
PUM1-201ENST00000257075 MVPQ14764 893 aaKnown RBP12.56□□□□□ -0.4
PUM1-201ENST00000257075 STK3Q13188 491 aa12.56□□□□□ -0.4
PUM1-201ENST00000257075 NIP7Q9Y221 180 aaKnown RBP eCLIP12.56□□□□□ -0.42e-60■■■■■ 52.7
PUM1-201ENST00000257075 IQCA1Q86XH1 822 aa12.56□□□□□ -0.4
PUM1-201ENST00000257075 EHMT1Q9H9B1 1298 aa12.56□□□□□ -0.4
PUM1-201ENST00000257075 NSD2O96028 1365 aa12.56□□□□□ -0.4
PUM1-201ENST00000257075 CWC27Q6UX04 472 aaKnown RBP12.55□□□□□ -0.4
PUM1-201ENST00000257075 GLRX3O76003 335 aaKnown RBP12.55□□□□□ -0.4
PUM1-201ENST00000257075 STIM1Q13586 685 aa12.55□□□□□ -0.4
PUM1-201ENST00000257075 ZC3H12CQ9C0D7 883 aaKnown RBP12.55□□□□□ -0.4
PUM1-201ENST00000257075 DNAI2Q9GZS0 605 aa12.55□□□□□ -0.4
PUM1-201ENST00000257075 USP21Q9UK80 565 aa12.55□□□□□ -0.4
PUM1-201ENST00000257075 U3KPZ7 1027 aaPredicted RBP12.55□□□□□ -0.4
PUM1-201ENST00000257075 PTPN23Q9H3S7 1636 aa12.55□□□□□ -0.4
PUM1-201ENST00000257075 RANBP6O60518 1105 aaKnown RBP12.55□□□□□ -0.4
PUM1-201ENST00000257075 GSTO1P78417 241 aa12.55□□□□□ -0.4
PUM1-201ENST00000257075 HSP90AB2PQ58FF8 381 aa12.55□□□□□ -0.4
PUM1-201ENST00000257075 SCAF11Q99590 1463 aaKnown RBP12.55□□□□□ -0.4
PUM1-201ENST00000257075 TRAPPC3LQ5T215 181 aa12.55□□□□□ -0.4
PUM1-201ENST00000257075 CTCFLQ8NI51 663 aaPredicted RBP12.55□□□□□ -0.4
PUM1-201ENST00000257075 RTN4Q9NQC3 1192 aaKnown RBP12.55□□□□□ -0.4
PUM1-201ENST00000257075 EXOC6BQ9Y2D4 811 aa12.55□□□□□ -0.4
PUM1-201ENST00000257075 ANKRD13DQ6ZTN6 518 aa12.54□□□□□ -0.4
PUM1-201ENST00000257075 RNF41Q9H4P4 317 aaPredicted RBP12.54□□□□□ -0.4
PUM1-201ENST00000257075 MAP3K2Q9Y2U5 619 aa12.54□□□□□ -0.4
PUM1-201ENST00000257075 GCP02774 474 aa12.54□□□□□ -0.4
PUM1-201ENST00000257075 NUTM1Q86Y26 1132 aa12.54□□□□□ -0.4
PUM1-201ENST00000257075 SIRT1Q96EB6 747 aa12.54□□□□□ -0.4
PUM1-201ENST00000257075 CCDC173Q0VFZ6 552 aa12.54□□□□□ -0.4
PUM1-201ENST00000257075 FILIP1LQ4L180 1135 aa12.54□□□□□ -0.4
PUM1-201ENST00000257075 UBE3BQ7Z3V4 1068 aa12.54□□□□□ -0.4
PUM1-201ENST00000257075 BEGAINQ9BUH8 593 aa12.54□□□□□ -0.4
PUM1-201ENST00000257075 RABEP1Q15276 862 aa12.53□□□□□ -0.4
PUM1-201ENST00000257075 FBXO3Q9UK99 471 aa12.53□□□□□ -0.4
PUM1-201ENST00000257075 TTF1Q15361 905 aaPredicted RBP12.53□□□□□ -0.4
PUM1-201ENST00000257075 EYA3Q99504 573 aa12.53□□□□□ -0.4
PUM1-201ENST00000257075 BOLA2Q9H3K6 86 aa12.53□□□□□ -0.4
PUM1-201ENST00000257075 GPATCH8Q9UKJ3 1502 aaKnown RBP12.53□□□□□ -0.4
PUM1-201ENST00000257075 HOMER1Q86YM7 354 aa12.53□□□□□ -0.4
PUM1-201ENST00000257075 FAM13BQ9NYF5 915 aa12.53□□□□□ -0.4
PUM1-201ENST00000257075 SLAIN2Q9P270 581 aa12.53□□□□□ -0.4
PUM1-201ENST00000257075 CCDC196A0A1B0GTZ2 297 aa12.52□□□□□ -0.4
PUM1-201ENST00000257075 FLIIQ13045 1269 aa12.52□□□□□ -0.4
PUM1-201ENST00000257075 CCNL1Q9UK58 526 aaPredicted RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms