RNA–Protein interactions for RNA: ENST00000254624.9

EFR3A-201, Transcript of EFR3 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFR3A, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-201ENST00000254624 WASF1Q92558 559 aa21.59■■□□□ 1.05
EFR3A-201ENST00000254624 PRM3Q9NNZ6 103 aa21.59■■□□□ 1.05
EFR3A-201ENST00000254624 TRMT112Q9UI30 125 aaKnown RBP21.59■■□□□ 1.05
EFR3A-201ENST00000254624 STK3Q13188 491 aa21.58■■□□□ 1.05
EFR3A-201ENST00000254624 PIK3R4Q99570 1358 aa21.58■■□□□ 1.05
EFR3A-201ENST00000254624 NUP133Q8WUM0 1156 aa21.58■■□□□ 1.05
EFR3A-201ENST00000254624 PRPF40AO75400 957 aaKnown RBP21.58■■□□□ 1.04
EFR3A-201ENST00000254624 TMOD2Q9NZR1 351 aa21.57■■□□□ 1.04
EFR3A-201ENST00000254624 LARP1BQ659C4 914 aaKnown RBP21.57■■□□□ 1.04
EFR3A-201ENST00000254624 ANKRD18BA2A2Z9 1011 aa21.57■■□□□ 1.04
EFR3A-201ENST00000254624 PBRM1Q86U86 1689 aa21.57■■□□□ 1.04
EFR3A-201ENST00000254624 FIBPO43427 364 aa21.57■■□□□ 1.04
EFR3A-201ENST00000254624 KRT85P78386 507 aa21.57■■□□□ 1.04
EFR3A-201ENST00000254624 SLC5A1P13866 664 aa21.56■■□□□ 1.04
EFR3A-201ENST00000254624 CIZ1Q9ULV3 898 aaPredicted RBP21.56■■□□□ 1.04
EFR3A-201ENST00000254624 U3KPZ7 1027 aaPredicted RBP21.56■■□□□ 1.04
EFR3A-201ENST00000254624 TSPY26PQ9H489 355 aa21.56■■□□□ 1.04
EFR3A-201ENST00000254624 A0A087WZG4 1122 aa21.56■■□□□ 1.04
EFR3A-201ENST00000254624 CCDC39Q9UFE4 941 aa21.56■■□□□ 1.04
EFR3A-201ENST00000254624 FILIP1LQ4L180 1135 aa21.55■■□□□ 1.04
EFR3A-201ENST00000254624 CAVIN1Q6NZI2 390 aaKnown RBP21.55■■□□□ 1.04
EFR3A-201ENST00000254624 MBIPQ9NS73 344 aa21.55■■□□□ 1.04
EFR3A-201ENST00000254624 SNRPA1P09661 255 aaKnown RBP21.55■■□□□ 1.04
EFR3A-201ENST00000254624 MAPKBP1O60336 1514 aa21.55■■□□□ 1.04
EFR3A-201ENST00000254624 NASPP49321 788 aaPredicted RBP21.55■■□□□ 1.04
EFR3A-201ENST00000254624 ZSCAN29Q8IWY8 852 aaPredicted RBP21.55■■□□□ 1.04
EFR3A-201ENST00000254624 LRRFIP2Q9Y608 721 aaKnown RBP21.55■■□□□ 1.04
EFR3A-201ENST00000254624 F6X3S4 739 aa21.54■■□□□ 1.04
EFR3A-201ENST00000254624 KRT18P05783 430 aaKnown RBP21.54■■□□□ 1.04
EFR3A-201ENST00000254624 MAGEC2Q9UBF1 373 aaPredicted RBP21.54■■□□□ 1.04
EFR3A-201ENST00000254624 ABCF2Q9UG63 623 aa21.54■■□□□ 1.04
EFR3A-201ENST00000254624 OFD1O75665 1012 aa21.54■■□□□ 1.04
EFR3A-201ENST00000254624 STK11IPQ8N1F8 1099 aa21.54■■□□□ 1.04
EFR3A-201ENST00000254624 TOM1O60784 492 aa21.54■■□□□ 1.04
EFR3A-201ENST00000254624 ARID3AQ99856 593 aa21.54■■□□□ 1.04
EFR3A-201ENST00000254624 FAM13BQ9NYF5 915 aa21.53■■□□□ 1.04
EFR3A-201ENST00000254624 TRIM27P14373 513 aa21.53■■□□□ 1.04
EFR3A-201ENST00000254624 DACH1Q9UI36 760 aa21.53■■□□□ 1.04
EFR3A-201ENST00000254624 ARHGEF12Q9NZN5 1544 aa21.53■■□□□ 1.04
EFR3A-201ENST00000254624 MAP3K12Q12852 859 aa21.53■■□□□ 1.04
EFR3A-201ENST00000254624 MAP3K2Q9Y2U5 619 aa21.53■■□□□ 1.04
EFR3A-201ENST00000254624 CWC25Q9NXE8 425 aaPredicted RBP21.52■■□□□ 1.04
EFR3A-201ENST00000254624 ZMYM3Q14202 1370 aa21.52■■□□□ 1.04
EFR3A-201ENST00000254624 DISP1Q96F81 1524 aa21.52■■□□□ 1.04
EFR3A-201ENST00000254624 CFAP45Q9UL16 551 aa21.52■■□□□ 1.04
EFR3A-201ENST00000254624 DHX8Q14562 1220 aaKnown RBP21.51■■□□□ 1.03
EFR3A-201ENST00000254624 CT47A1Q5JQC4 288 aaPredicted RBP21.51■■□□□ 1.03
EFR3A-201ENST00000254624 ARHGAP45Q92619 1136 aa21.51■■□□□ 1.03
EFR3A-201ENST00000254624 NAP1L1P55209 391 aaKnown RBP21.51■■□□□ 1.03
EFR3A-201ENST00000254624 RPGRQ92834 1020 aaKnown RBP21.51■■□□□ 1.03
EFR3A-201ENST00000254624 SPINK5Q9NQ38 1064 aaPredicted RBP21.51■■□□□ 1.03
EFR3A-201ENST00000254624 TRPM2O94759 1503 aa21.51■■□□□ 1.03
EFR3A-201ENST00000254624 CEBPZQ03701 1054 aaKnown RBP21.51■■□□□ 1.03
EFR3A-201ENST00000254624 ANKIB1Q9P2G1 1089 aa21.51■■□□□ 1.03
EFR3A-201ENST00000254624 DNMT1P26358 1616 aaKnown RBP21.51■■□□□ 1.03
EFR3A-201ENST00000254624 ME1P48163 572 aa21.5■■□□□ 1.03
EFR3A-201ENST00000254624 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.5■■□□□ 1.03
EFR3A-201ENST00000254624 SLF2Q8IX21 1173 aa21.5■■□□□ 1.03
EFR3A-201ENST00000254624 PDILTQ8N807 584 aa21.5■■□□□ 1.03
EFR3A-201ENST00000254624 ZCRB1Q8TBF4 217 aaKnown RBP21.5■■□□□ 1.03
EFR3A-201ENST00000254624 TRIM5Q9C035 493 aa21.5■■□□□ 1.03
EFR3A-201ENST00000254624 SMARCA5O60264 1052 aaPredicted RBP21.5■■□□□ 1.03
EFR3A-201ENST00000254624 CHRNA2Q15822 529 aa21.5■■□□□ 1.03
EFR3A-201ENST00000254624 CASTP20810 708 aaKnown RBP21.5■■□□□ 1.03
EFR3A-201ENST00000254624 PPP1R42Q7Z4L9 355 aa21.5■■□□□ 1.03
EFR3A-201ENST00000254624 BOLA2Q9H3K6 86 aa21.5■■□□□ 1.03
EFR3A-201ENST00000254624 C19orf44Q9H6X5 657 aa21.5■■□□□ 1.03
EFR3A-201ENST00000254624 SMARCE1Q969G3 411 aa21.49■■□□□ 1.03
EFR3A-201ENST00000254624 HMGB1P09429 215 aaKnown RBP21.49■■□□□ 1.03
EFR3A-201ENST00000254624 STIM1Q13586 685 aa21.49■■□□□ 1.03
EFR3A-201ENST00000254624 ABCC1P33527 1531 aa21.49■■□□□ 1.03
EFR3A-201ENST00000254624 WWC2Q6AWC2 1192 aa21.49■■□□□ 1.03
EFR3A-201ENST00000254624 USP5P45974 858 aa21.49■■□□□ 1.03
EFR3A-201ENST00000254624 CDC5LQ99459 802 aaKnown RBP21.49■■□□□ 1.03
EFR3A-201ENST00000254624 RSPH6AQ9H0K4 717 aa21.49■■□□□ 1.03
EFR3A-201ENST00000254624 HSP90AB2PQ58FF8 381 aa21.48■■□□□ 1.03
EFR3A-201ENST00000254624 AKAP4Q5JQC9 854 aa21.48■■□□□ 1.03
EFR3A-201ENST00000254624 CCDC192P0DO97 292 aa21.48■■□□□ 1.03
EFR3A-201ENST00000254624 AK7Q96M32 723 aa21.48■■□□□ 1.03
EFR3A-201ENST00000254624 ZBTB3Q9H5J0 574 aa21.48■■□□□ 1.03
EFR3A-201ENST00000254624 ATP10AO60312 1499 aa21.48■■□□□ 1.03
EFR3A-201ENST00000254624 POLR3AO14802 1390 aaPredicted RBP21.48■■□□□ 1.03
EFR3A-201ENST00000254624 ABCA5Q8WWZ7 1642 aa21.48■■□□□ 1.03
EFR3A-201ENST00000254624 FLT4P35916 1363 aa21.47■■□□□ 1.03
EFR3A-201ENST00000254624 ZFYVE9O95405 1425 aa21.47■■□□□ 1.03
EFR3A-201ENST00000254624 C20orf194Q5TEA3 1177 aa21.47■■□□□ 1.03
EFR3A-201ENST00000254624 DZIP1Q86YF9 867 aaKnown RBP21.47■■□□□ 1.03
EFR3A-201ENST00000254624 NPATQ14207 1427 aa21.47■■□□□ 1.03
EFR3A-201ENST00000254624 CCP110O43303 1012 aa21.47■■□□□ 1.03
EFR3A-201ENST00000254624 TMEM132AQ24JP5 1023 aa21.47■■□□□ 1.03
EFR3A-201ENST00000254624 RNF214Q8ND24 703 aa21.47■■□□□ 1.03
EFR3A-201ENST00000254624 FAM83GA6ND36 823 aa21.46■■□□□ 1.03
EFR3A-201ENST00000254624 SMC2O95347 1197 aa21.46■■□□□ 1.03
EFR3A-201ENST00000254624 ODF2Q5BJF6 829 aa21.46■■□□□ 1.03
EFR3A-201ENST00000254624 NAPBQ9H115 298 aa21.46■■□□□ 1.03
EFR3A-201ENST00000254624 TBX22Q9Y458 520 aa21.46■■□□□ 1.03
EFR3A-201ENST00000254624 TTF1Q15361 905 aaPredicted RBP21.46■■□□□ 1.03
EFR3A-201ENST00000254624 TNMDQ9H2S6 317 aa21.46■■□□□ 1.03
EFR3A-201ENST00000254624 EVI5LQ96CN4 794 aa21.46■■□□□ 1.03
EFR3A-201ENST00000254624 SPATA32Q96LK8 384 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms