RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ERCC4Q92889 916 aaPredicted RBP21.95■■□□□ 1.1
SMARCC1-201ENST00000254480 DACH1Q9UI36 760 aa21.95■■□□□ 1.1
SMARCC1-201ENST00000254480 CEP57L1Q8IYX8 460 aa21.95■■□□□ 1.1
SMARCC1-201ENST00000254480 RPGRIP1LQ68CZ1 1315 aa21.95■■□□□ 1.1
SMARCC1-201ENST00000254480 KLHL10Q6JEL2 608 aa21.94■■□□□ 1.1
SMARCC1-201ENST00000254480 ADGRF5Q8IZF2 1346 aa21.94■■□□□ 1.1
SMARCC1-201ENST00000254480 KCNH5Q8NCM2 988 aa21.94■■□□□ 1.1
SMARCC1-201ENST00000254480 TSPYL1Q9H0U9 437 aa21.94■■□□□ 1.1
SMARCC1-201ENST00000254480 MKNK2Q9HBH9 465 aa21.94■■□□□ 1.1
SMARCC1-201ENST00000254480 TRMT112Q9UI30 125 aaKnown RBP21.94■■□□□ 1.1
SMARCC1-201ENST00000254480 MYO6Q9UM54 1294 aa21.94■■□□□ 1.1
SMARCC1-201ENST00000254480 RDXP35241 583 aaKnown RBP21.94■■□□□ 1.1
SMARCC1-201ENST00000254480 RARSP54136 660 aaKnown RBP21.94■■□□□ 1.1
SMARCC1-201ENST00000254480 FAM83GA6ND36 823 aa21.94■■□□□ 1.1
SMARCC1-201ENST00000254480 CFAP45Q9UL16 551 aa21.94■■□□□ 1.1
SMARCC1-201ENST00000254480 RANBP6O60518 1105 aaKnown RBP21.93■■□□□ 1.1
SMARCC1-201ENST00000254480 RAB11FIP4Q86YS3 637 aa21.93■■□□□ 1.1
SMARCC1-201ENST00000254480 AMOTL2Q9Y2J4 779 aa21.93■■□□□ 1.1
SMARCC1-201ENST00000254480 IFT140Q96RY7 1462 aa21.93■■□□□ 1.1
SMARCC1-201ENST00000254480 TIAM1Q13009 1591 aa21.93■■□□□ 1.1
SMARCC1-201ENST00000254480 CRACR2BQ8N4Y2 399 aaPredicted RBP21.93■■□□□ 1.1
SMARCC1-201ENST00000254480 ATP5J2-PTCD1G3V325 749 aa21.93■■□□□ 1.1
SMARCC1-201ENST00000254480 MCM4P33991 863 aa21.93■■□□□ 1.1
SMARCC1-201ENST00000254480 ZSCAN31Q96LW9 406 aaPredicted RBP21.92■■□□□ 1.1
SMARCC1-201ENST00000254480 PPP6R1Q9UPN7 881 aa21.92■■□□□ 1.1
SMARCC1-201ENST00000254480 SSR1P43307 286 aaKnown RBP21.92■■□□□ 1.1
SMARCC1-201ENST00000254480 CCDC144CPQ8IYA2 1237 aa21.92■■□□□ 1.1
SMARCC1-201ENST00000254480 ANXA1P04083 346 aa21.92■■□□□ 1.1
SMARCC1-201ENST00000254480 LARP1Q6PKG0 1096 aaKnown RBP21.92■■□□□ 1.1
SMARCC1-201ENST00000254480 BMP2KQ9NSY1 1161 aaPredicted RBP21.92■■□□□ 1.1
SMARCC1-201ENST00000254480 CCP110O43303 1012 aa21.92■■□□□ 1.1
SMARCC1-201ENST00000254480 CCT2P78371 535 aaKnown RBP21.91■■□□□ 1.1
SMARCC1-201ENST00000254480 KRT32Q14532 448 aa21.91■■□□□ 1.1
SMARCC1-201ENST00000254480 CAVIN4Q5BKX8 364 aa21.91■■□□□ 1.1
SMARCC1-201ENST00000254480 SUPT6HQ7KZ85 1726 aaKnown RBP21.91■■□□□ 1.1
SMARCC1-201ENST00000254480 EIF5P55010 431 aaKnown RBP21.91■■□□□ 1.1
SMARCC1-201ENST00000254480 NAPBQ9H115 298 aa21.91■■□□□ 1.1
SMARCC1-201ENST00000254480 SNRKQ9NRH2 765 aa21.91■■□□□ 1.1
SMARCC1-201ENST00000254480 TAX1BP1Q86VP1 789 aa21.91■■□□□ 1.1
SMARCC1-201ENST00000254480 CFAP100Q494V2 611 aa21.9■■□□□ 1.1
SMARCC1-201ENST00000254480 DZIP1Q86YF9 867 aaKnown RBP21.9■■□□□ 1.1
SMARCC1-201ENST00000254480 CCDC112Q8NEF3 446 aa21.9■■□□□ 1.1
SMARCC1-201ENST00000254480 ENOX2Q16206 610 aaKnown RBP21.9■■□□□ 1.1
SMARCC1-201ENST00000254480 EFCAB5A4FU69 1503 aa21.9■■□□□ 1.1
SMARCC1-201ENST00000254480 IFIT5Q13325 482 aaKnown RBP21.9■■□□□ 1.1
SMARCC1-201ENST00000254480 GLRX3O76003 335 aaKnown RBP21.89■■□□□ 1.1
SMARCC1-201ENST00000254480 UBA5Q9GZZ9 404 aa21.89■■□□□ 1.1
SMARCC1-201ENST00000254480 PHF8Q9UPP1 1060 aa21.89■■□□□ 1.09
SMARCC1-201ENST00000254480 A0A087WZG4 1122 aa21.89■■□□□ 1.09
SMARCC1-201ENST00000254480 MYCNP04198 464 aaPredicted RBP21.88■■□□□ 1.09
SMARCC1-201ENST00000254480 CHRNA2Q15822 529 aa21.88■■□□□ 1.09
SMARCC1-201ENST00000254480 TMX1Q9H3N1 280 aa21.88■■□□□ 1.09
SMARCC1-201ENST00000254480 TMOD2Q9NZR1 351 aa21.88■■□□□ 1.09
SMARCC1-201ENST00000254480 U3KPZ7 1027 aaPredicted RBP21.88■■□□□ 1.09
SMARCC1-201ENST00000254480 GDPD2Q9HCC8 539 aa21.88■■□□□ 1.09
SMARCC1-201ENST00000254480 AKAP2Q9Y2D5 859 aa21.88■■□□□ 1.09
SMARCC1-201ENST00000254480 ZNF652Q9Y2D9 606 aa21.87■■□□□ 1.09
SMARCC1-201ENST00000254480 DNAAF4Q8WXU2 420 aa21.87■■□□□ 1.09
SMARCC1-201ENST00000254480 SEC63Q9UGP8 760 aaKnown RBP21.87■■□□□ 1.09
SMARCC1-201ENST00000254480 WDR78Q5VTH9 848 aa21.87■■□□□ 1.09
SMARCC1-201ENST00000254480 PLCD4Q9BRC7 762 aa21.87■■□□□ 1.09
SMARCC1-201ENST00000254480 CCDC96Q2M329 555 aa21.87■■□□□ 1.09
SMARCC1-201ENST00000254480 POGZQ7Z3K3 1410 aa21.87■■□□□ 1.09
SMARCC1-201ENST00000254480 RAB11FIP3O75154 756 aa21.86■■□□□ 1.09
SMARCC1-201ENST00000254480 TAF3Q5VWG9 929 aa21.86■■□□□ 1.09
SMARCC1-201ENST00000254480 MAP3K2Q9Y2U5 619 aa21.86■■□□□ 1.09
SMARCC1-201ENST00000254480 DNA2P51530 1060 aa21.86■■□□□ 1.09
SMARCC1-201ENST00000254480 CBFA2T2O43439 604 aa21.86■■□□□ 1.09
SMARCC1-201ENST00000254480 KIAA1328Q86T90 577 aa21.86■■□□□ 1.09
SMARCC1-201ENST00000254480 EPRSP07814 1512 aaKnown RBP21.86■■□□□ 1.09
SMARCC1-201ENST00000254480 MAP3K11Q16584 847 aa21.86■■□□□ 1.09
SMARCC1-201ENST00000254480 NAIPQ13075 1403 aa21.86■■□□□ 1.09
SMARCC1-201ENST00000254480 HAND2P61296 217 aa21.86■■□□□ 1.09
SMARCC1-201ENST00000254480 CC2D2AQ9P2K1 1620 aa21.85■■□□□ 1.09
SMARCC1-201ENST00000254480 IDI1Q13907 227 aa21.85■■□□□ 1.09
SMARCC1-201ENST00000254480 SEPT7Q16181 437 aaKnown RBP21.85■■□□□ 1.09
SMARCC1-201ENST00000254480 NGLY1Q96IV0 654 aa21.85■■□□□ 1.09
SMARCC1-201ENST00000254480 UQCRHLA0A096LP55 91 aa21.85■■□□□ 1.09
SMARCC1-201ENST00000254480 UQCRHP07919 91 aa21.85■■□□□ 1.09
SMARCC1-201ENST00000254480 ERLIN2O94905 339 aa21.85■■□□□ 1.09
SMARCC1-201ENST00000254480 WASF1Q92558 559 aa21.84■■□□□ 1.09
SMARCC1-201ENST00000254480 PRXQ9BXM0 1461 aa21.84■■□□□ 1.09
SMARCC1-201ENST00000254480 LUC7LQ9NQ29 371 aaKnown RBP21.84■■□□□ 1.09
SMARCC1-201ENST00000254480 GOLIM4O00461 696 aa21.84■■□□□ 1.09
SMARCC1-201ENST00000254480 CKAP2LQ8IYA6 745 aa21.84■■□□□ 1.09
SMARCC1-201ENST00000254480 GOLGA6L10A6NI86 522 aa21.84■■□□□ 1.09
SMARCC1-201ENST00000254480 LIG1P18858 919 aa21.84■■□□□ 1.09
SMARCC1-201ENST00000254480 WASLO00401 505 aaPredicted RBP21.83■■□□□ 1.09
SMARCC1-201ENST00000254480 TRIM27P14373 513 aa21.83■■□□□ 1.09
SMARCC1-201ENST00000254480 SSFA2P28290 1259 aa21.83■■□□□ 1.09
SMARCC1-201ENST00000254480 PLB1Q6P1J6 1458 aa21.83■■□□□ 1.09
SMARCC1-201ENST00000254480 VAT1LQ9HCJ6 419 aa21.83■■□□□ 1.09
SMARCC1-201ENST00000254480 CD109Q6YHK3 1445 aa21.83■■□□□ 1.08
SMARCC1-201ENST00000254480 ZNF213O14771 459 aa21.83■■□□□ 1.08
SMARCC1-201ENST00000254480 EPB41L2O43491 1005 aaKnown RBP21.83■■□□□ 1.08
SMARCC1-201ENST00000254480 PANK2Q9BZ23 570 aa21.83■■□□□ 1.08
SMARCC1-201ENST00000254480 LEKR1Q6ZMV7 388 aa21.82■■□□□ 1.08
SMARCC1-201ENST00000254480 C8orf76Q96K31 380 aa21.82■■□□□ 1.08
SMARCC1-201ENST00000254480 C6orf229H3BNL8 230 aa21.82■■□□□ 1.08
SMARCC1-201ENST00000254480 FLIIQ13045 1269 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms