RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 THEMISQ8N1K5 641 aaPredicted RBP15.37■□□□□ 0.05
PCDHGA3-201ENST00000253812 MICALL1Q8N3F8 863 aa15.37■□□□□ 0.05
PCDHGA3-201ENST00000253812 SCAND2PQ9GZW5 306 aaPredicted RBP15.37■□□□□ 0.05
PCDHGA3-201ENST00000253812 OGFRQ9NZT2 677 aa15.37■□□□□ 0.05
PCDHGA3-201ENST00000253812 CLGNO14967 610 aa15.37■□□□□ 0.05
PCDHGA3-201ENST00000253812 SARNPP82979 210 aaKnown RBP15.37■□□□□ 0.05
PCDHGA3-201ENST00000253812 GIGYF2Q6Y7W6 1299 aaKnown RBP15.37■□□□□ 0.05
PCDHGA3-201ENST00000253812 CCDC171Q6TFL3 1326 aa15.36■□□□□ 0.05
PCDHGA3-201ENST00000253812 SART3Q15020 963 aaKnown RBP15.36■□□□□ 0.05
PCDHGA3-201ENST00000253812 CHD1LQ86WJ1 897 aa15.36■□□□□ 0.05
PCDHGA3-201ENST00000253812 CCAR1Q8IX12 1150 aaKnown RBP15.36■□□□□ 0.05
PCDHGA3-201ENST00000253812 PAIP2Q9BPZ3 127 aaKnown RBP15.36■□□□□ 0.05
PCDHGA3-201ENST00000253812 PAFAH1B1P43034 410 aa15.36■□□□□ 0.05
PCDHGA3-201ENST00000253812 TOP1P11387 765 aaKnown RBP15.36■□□□□ 0.05
PCDHGA3-201ENST00000253812 GBP6Q6ZN66 633 aa15.36■□□□□ 0.05
PCDHGA3-201ENST00000253812 C10orf67Q8IYJ2 551 aa15.36■□□□□ 0.05
PCDHGA3-201ENST00000253812 ZNF526Q8TF50 670 aaPredicted RBP15.35■□□□□ 0.05
PCDHGA3-201ENST00000253812 ZFP91Q96JP5 570 aaPredicted RBP15.35■□□□□ 0.05
PCDHGA3-201ENST00000253812 A0A1B0GUA9 196 aa15.35■□□□□ 0.05
PCDHGA3-201ENST00000253812 A0A1B0GUL7 405 aa15.35■□□□□ 0.05
PCDHGA3-201ENST00000253812 IFFO1Q0D2I5 559 aa15.35■□□□□ 0.05
PCDHGA3-201ENST00000253812 WASHC4Q2M389 1173 aa15.35■□□□□ 0.05
PCDHGA3-201ENST00000253812 SURF6O75683 361 aaKnown RBP15.35■□□□□ 0.05
PCDHGA3-201ENST00000253812 BCAR3O75815 825 aa15.35■□□□□ 0.05
PCDHGA3-201ENST00000253812 CAVIN2O95810 425 aa15.35■□□□□ 0.05
PCDHGA3-201ENST00000253812 CAPN2P17655 700 aa15.35■□□□□ 0.05
PCDHGA3-201ENST00000253812 SSFA2P28290 1259 aa15.34■□□□□ 0.05
PCDHGA3-201ENST00000253812 ABTB2Q8N961 1025 aa15.34■□□□□ 0.05
PCDHGA3-201ENST00000253812 PNISRQ8TF01 805 aaKnown RBP15.34■□□□□ 0.05
PCDHGA3-201ENST00000253812 RPGRIP1LQ68CZ1 1315 aa15.34■□□□□ 0.05
PCDHGA3-201ENST00000253812 SPECC1Q5M775 1068 aa15.34■□□□□ 0.05
PCDHGA3-201ENST00000253812 TTC5Q8N0Z6 440 aa15.34■□□□□ 0.05
PCDHGA3-201ENST00000253812 RBM28Q9NW13 759 aaKnown RBP15.34■□□□□ 0.05
PCDHGA3-201ENST00000253812 ADGRL1O94910 1474 aa15.34■□□□□ 0.05
PCDHGA3-201ENST00000253812 EBAG9O00559 213 aa15.34■□□□□ 0.05
PCDHGA3-201ENST00000253812 TSPYL4Q9UJ04 414 aa15.34■□□□□ 0.05
PCDHGA3-201ENST00000253812 CTAGE5O15320 804 aa15.33■□□□□ 0.05
PCDHGA3-201ENST00000253812 ESCO1Q5FWF5 840 aa15.33■□□□□ 0.05
PCDHGA3-201ENST00000253812 CCDC113Q9H0I3 377 aa15.33■□□□□ 0.05
PCDHGA3-201ENST00000253812 KIF14Q15058 1648 aa15.33■□□□□ 0.05
PCDHGA3-201ENST00000253812 CAMK4Q16566 473 aa15.33■□□□□ 0.04
PCDHGA3-201ENST00000253812 PRKAR2BP31323 418 aa15.33■□□□□ 0.04
PCDHGA3-201ENST00000253812 ZNF397Q8NF99 534 aaPredicted RBP15.33■□□□□ 0.04
PCDHGA3-201ENST00000253812 PANK2Q9BZ23 570 aa15.33■□□□□ 0.04
PCDHGA3-201ENST00000253812 EIF5P55010 431 aaKnown RBP15.33■□□□□ 0.04
PCDHGA3-201ENST00000253812 MVPQ14764 893 aaKnown RBP15.33■□□□□ 0.04
PCDHGA3-201ENST00000253812 PROSER2Q86WR7 435 aaPredicted RBP15.33■□□□□ 0.04
PCDHGA3-201ENST00000253812 NLRP2Q9NX02 1062 aa15.33■□□□□ 0.04
PCDHGA3-201ENST00000253812 GCOM1H8Y6P7 765 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA3-201ENST00000253812 MYZAPP0CAP1 466 aa15.32■□□□□ 0.04
PCDHGA3-201ENST00000253812 BLOC1S2Q6QNY1 142 aa15.32■□□□□ 0.04
PCDHGA3-201ENST00000253812 IGSF3O75054 1194 aa15.32■□□□□ 0.04
PCDHGA3-201ENST00000253812 GTF2E1P29083 439 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA3-201ENST00000253812 SPA17Q15506 151 aa15.32■□□□□ 0.04
PCDHGA3-201ENST00000253812 PAXIP1Q6ZW49 1069 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA3-201ENST00000253812 CEP57Q86XR8 500 aa15.32■□□□□ 0.04
PCDHGA3-201ENST00000253812 THOC2Q8NI27 1593 aaKnown RBP15.32■□□□□ 0.04
PCDHGA3-201ENST00000253812 TUBB4AP04350 444 aa15.32■□□□□ 0.04
PCDHGA3-201ENST00000253812 CDK5RAP3Q96JB5 506 aa15.32■□□□□ 0.04
PCDHGA3-201ENST00000253812 RAI14Q9P0K7 980 aa15.32■□□□□ 0.04
PCDHGA3-201ENST00000253812 RAPGEF4Q8WZA2 1011 aa15.31■□□□□ 0.04
PCDHGA3-201ENST00000253812 CEP63Q96MT8 703 aa15.31■□□□□ 0.04
PCDHGA3-201ENST00000253812 DDX19AQ9NUU7 478 aaKnown RBP15.31■□□□□ 0.04
PCDHGA3-201ENST00000253812 ERC1Q8IUD2 1116 aa15.31■□□□□ 0.04
PCDHGA3-201ENST00000253812 BAG4O95429 457 aaKnown RBP15.31■□□□□ 0.04
PCDHGA3-201ENST00000253812 SRRTQ9BXP5 876 aaKnown RBP15.31■□□□□ 0.04
PCDHGA3-201ENST00000253812 NAA15Q9BXJ9 866 aaKnown RBP15.31■□□□□ 0.04
PCDHGA3-201ENST00000253812 SRCIN1Q9C0H9 1055 aa15.31■□□□□ 0.04
PCDHGA3-201ENST00000253812 V9GYY5 206 aaPredicted RBP15.31■□□□□ 0.04
PCDHGA3-201ENST00000253812 STK3Q13188 491 aa15.3■□□□□ 0.04
PCDHGA3-201ENST00000253812 LRSAM1Q6UWE0 723 aa15.3■□□□□ 0.04
PCDHGA3-201ENST00000253812 PDRG1Q9NUG6 133 aa15.3■□□□□ 0.04
PCDHGA3-201ENST00000253812 SLU7O95391 586 aaKnown RBP15.3■□□□□ 0.04
PCDHGA3-201ENST00000253812 GABPB1Q06547 395 aaPredicted RBP15.3■□□□□ 0.04
PCDHGA3-201ENST00000253812 TANGO6Q9C0B7 1094 aa15.3■□□□□ 0.04
PCDHGA3-201ENST00000253812 TMCO5BA8MYB1 307 aa15.3■□□□□ 0.04
PCDHGA3-201ENST00000253812 EXOSC9Q06265 439 aaKnown RBP15.3■□□□□ 0.04
PCDHGA3-201ENST00000253812 OTUD6BQ8N6M0 293 aa15.3■□□□□ 0.04
PCDHGA3-201ENST00000253812 RSRC1Q96IZ7 334 aaKnown RBP15.29■□□□□ 0.04
PCDHGA3-201ENST00000253812 NEUROD6Q96NK8 337 aa15.29■□□□□ 0.04
PCDHGA3-201ENST00000253812 PLEKHH1Q9ULM0 1364 aa15.29■□□□□ 0.04
PCDHGA3-201ENST00000253812 G3V3G9 751 aa15.29■□□□□ 0.04
PCDHGA3-201ENST00000253812 TERF1P54274 439 aa15.29■□□□□ 0.04
PCDHGA3-201ENST00000253812 DCAF8Q5TAQ9 597 aa15.29■□□□□ 0.04
PCDHGA3-201ENST00000253812 ATF7IPQ6VMQ6 1270 aa15.29■□□□□ 0.04
PCDHGA3-201ENST00000253812 TRIM22Q8IYM9 498 aa15.29■□□□□ 0.04
PCDHGA3-201ENST00000253812 FBF1Q8TES7 1133 aa15.29■□□□□ 0.04
PCDHGA3-201ENST00000253812 BCCIPQ9P287 314 aaKnown RBP eCLIP15.29■□□□□ 0.04
PCDHGA3-201ENST00000253812 SYTL4Q96C24 671 aaPredicted RBP15.29■□□□□ 0.04
PCDHGA3-201ENST00000253812 GPATCH8Q9UKJ3 1502 aaKnown RBP15.29■□□□□ 0.04
PCDHGA3-201ENST00000253812 VGLL3A8MV65 326 aa15.28■□□□□ 0.04
PCDHGA3-201ENST00000253812 ZSCAN23Q3MJ62 389 aa15.28■□□□□ 0.04
PCDHGA3-201ENST00000253812 C6orf163Q5TEZ5 329 aa15.28■□□□□ 0.04
PCDHGA3-201ENST00000253812 FBXO31Q5XUX0 539 aaPredicted RBP15.28■□□□□ 0.04
PCDHGA3-201ENST00000253812 CCDC150Q8NCX0 1101 aa15.28■□□□□ 0.04
PCDHGA3-201ENST00000253812 GPRASP1Q5JY77 1395 aa15.28■□□□□ 0.04
PCDHGA3-201ENST00000253812 MCM6Q14566 821 aa15.28■□□□□ 0.04
PCDHGA3-201ENST00000253812 ZNF165P49910 485 aa15.28■□□□□ 0.04
PCDHGA3-201ENST00000253812 GNG11P61952 73 aa15.28■□□□□ 0.04
PCDHGA3-201ENST00000253812 WDR66Q8TBY9 1149 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms