RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 HCLS1P14317 486 aaPredicted RBP14.51□□□□□ -0.09
USHBP1-201ENST00000252597 LRRFIP2Q9Y608 721 aaKnown RBP14.51□□□□□ -0.09
USHBP1-201ENST00000252597 TULP4Q9NRJ4 1543 aa14.51□□□□□ -0.09
USHBP1-201ENST00000252597 GNAI2P04899 355 aa14.51□□□□□ -0.09
USHBP1-201ENST00000252597 EIF4A2Q14240 407 aaKnown RBP14.51□□□□□ -0.09
USHBP1-201ENST00000252597 CWC27Q6UX04 472 aaKnown RBP14.51□□□□□ -0.09
USHBP1-201ENST00000252597 FERMT3Q86UX7 667 aa14.51□□□□□ -0.09
USHBP1-201ENST00000252597 LRRCC1Q9C099 1032 aa14.51□□□□□ -0.09
USHBP1-201ENST00000252597 ARHGEF28Q8N1W1 1705 aaKnown RBP14.5□□□□□ -0.09
USHBP1-201ENST00000252597 UNC5CLQ8IV45 518 aa14.5□□□□□ -0.09
USHBP1-201ENST00000252597 PPP1R9BQ96SB3 815 aa14.5□□□□□ -0.09
USHBP1-201ENST00000252597 PNMA6EA0A0J9YXQ4 647 aa14.5□□□□□ -0.09
USHBP1-201ENST00000252597 MX1P20591 662 aa14.5□□□□□ -0.09
USHBP1-201ENST00000252597 FOSBP53539 338 aa14.5□□□□□ -0.09
USHBP1-201ENST00000252597 LRSAM1Q6UWE0 723 aa14.5□□□□□ -0.09
USHBP1-201ENST00000252597 PDCL3Q9H2J4 239 aa14.5□□□□□ -0.09
USHBP1-201ENST00000252597 DRC7Q8IY82 874 aa14.49□□□□□ -0.09
USHBP1-201ENST00000252597 SLC26A8Q96RN1 970 aa14.49□□□□□ -0.09
USHBP1-201ENST00000252597 ALKQ9UM73 1620 aa14.49□□□□□ -0.09
USHBP1-201ENST00000252597 USHBP1Q8N6Y0 703 aa14.49□□□□□ -0.09
USHBP1-201ENST00000252597 CNPY2Q9Y2B0 182 aa14.49□□□□□ -0.09
USHBP1-201ENST00000252597 USP48Q86UV5 1035 aa14.49□□□□□ -0.09
USHBP1-201ENST00000252597 NGDNQ8NEJ9 315 aaKnown RBP14.49□□□□□ -0.09
USHBP1-201ENST00000252597 SYAP1Q96A49 352 aaPredicted RBP14.49□□□□□ -0.09
USHBP1-201ENST00000252597 CCDC39Q9UFE4 941 aa14.49□□□□□ -0.09
USHBP1-201ENST00000252597 ZHX1Q9UKY1 873 aaPredicted RBP14.49□□□□□ -0.09
USHBP1-201ENST00000252597 TNRQ92752 1358 aa14.49□□□□□ -0.09
USHBP1-201ENST00000252597 TCEANC2Q96MN5 208 aa14.48□□□□□ -0.09
USHBP1-201ENST00000252597 ZKSCAN5Q9Y2L8 839 aa14.48□□□□□ -0.09
USHBP1-201ENST00000252597 WASLO00401 505 aaPredicted RBP14.48□□□□□ -0.09
USHBP1-201ENST00000252597 ZNF445P59923 1031 aa14.48□□□□□ -0.09
USHBP1-201ENST00000252597 LMOD2Q6P5Q4 547 aa14.48□□□□□ -0.09
USHBP1-201ENST00000252597 CCDC61Q9Y6R9 512 aa14.48□□□□□ -0.09
USHBP1-201ENST00000252597 GIMAP6Q6P9H5 292 aa14.48□□□□□ -0.09
USHBP1-201ENST00000252597 FBXW7Q969H0 707 aa14.48□□□□□ -0.09
USHBP1-201ENST00000252597 SPATA31D1Q6ZQQ2 1576 aa14.47□□□□□ -0.09
USHBP1-201ENST00000252597 PPFIA3O75145 1194 aa14.47□□□□□ -0.09
USHBP1-201ENST00000252597 CAMK4Q16566 473 aa14.47□□□□□ -0.09
USHBP1-201ENST00000252597 NAP1L2Q9ULW6 460 aaPredicted RBP14.47□□□□□ -0.09
USHBP1-201ENST00000252597 PTPRMP28827 1452 aa14.47□□□□□ -0.09
USHBP1-201ENST00000252597 IGSF3O75054 1194 aa14.47□□□□□ -0.09
USHBP1-201ENST00000252597 ESYT1Q9BSJ8 1104 aa14.47□□□□□ -0.09
USHBP1-201ENST00000252597 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.47□□□□□ -0.09
USHBP1-201ENST00000252597 SHPRHQ149N8 1683 aa14.47□□□□□ -0.09
USHBP1-201ENST00000252597 NOL7Q9UMY1 257 aaKnown RBP14.46□□□□□ -0.09
USHBP1-201ENST00000252597 MBD3O95983 291 aa14.46□□□□□ -0.09
USHBP1-201ENST00000252597 UBTFL1P0CB47 393 aaPredicted RBP14.46□□□□□ -0.09
USHBP1-201ENST00000252597 HAP1P54257 671 aaPredicted RBP14.46□□□□□ -0.09
USHBP1-201ENST00000252597 CCDC83Q8IWF9 413 aa14.46□□□□□ -0.1
USHBP1-201ENST00000252597 SMC3Q9UQE7 1217 aa14.46□□□□□ -0.1
USHBP1-201ENST00000252597 NCOA3Q9Y6Q9 1424 aa14.45□□□□□ -0.1
USHBP1-201ENST00000252597 METP08581 1390 aa14.45□□□□□ -0.1
USHBP1-201ENST00000252597 CBX1P83916 185 aa14.45□□□□□ -0.1
USHBP1-201ENST00000252597 FAM173BQ6P4H8 233 aa14.45□□□□□ -0.1
USHBP1-201ENST00000252597 MTHFSDQ2M296 383 aaKnown RBP14.45□□□□□ -0.1
USHBP1-201ENST00000252597 RTL1A6NKG5 1358 aa14.44□□□□□ -0.1
USHBP1-201ENST00000252597 GOLGA6L4A6NEF3 574 aa14.44□□□□□ -0.1
USHBP1-201ENST00000252597 SRGAP3O43295 1099 aa14.44□□□□□ -0.1
USHBP1-201ENST00000252597 ZNF853P0CG23 659 aa14.44□□□□□ -0.1
USHBP1-201ENST00000252597 HDGFP51858 240 aaKnown RBP14.44□□□□□ -0.1
USHBP1-201ENST00000252597 STK3Q13188 491 aa14.44□□□□□ -0.1
USHBP1-201ENST00000252597 ADCY5O95622 1261 aa14.44□□□□□ -0.1
USHBP1-201ENST00000252597 FLIIQ13045 1269 aa14.44□□□□□ -0.1
USHBP1-201ENST00000252597 NECAB1Q8N987 351 aa14.44□□□□□ -0.1
USHBP1-201ENST00000252597 SPDYE4A6NLX3 237 aa14.43□□□□□ -0.1
USHBP1-201ENST00000252597 IL25Q9H293 177 aa14.43□□□□□ -0.1
USHBP1-201ENST00000252597 CASTP20810 708 aaKnown RBP14.43□□□□□ -0.1
USHBP1-201ENST00000252597 CHMLP26374 656 aa14.43□□□□□ -0.1
USHBP1-201ENST00000252597 CEBPZQ03701 1054 aaKnown RBP14.42□□□□□ -0.1
USHBP1-201ENST00000252597 ZNF592Q92610 1267 aa14.42□□□□□ -0.1
USHBP1-201ENST00000252597 PHAXQ9H814 394 aaKnown RBP14.42□□□□□ -0.1
USHBP1-201ENST00000252597 DIAPH3Q9NSV4 1193 aa14.42□□□□□ -0.1
USHBP1-201ENST00000252597 LRRC7Q96NW7 1537 aa14.42□□□□□ -0.1
USHBP1-201ENST00000252597 LTKP29376 864 aa14.42□□□□□ -0.1
USHBP1-201ENST00000252597 CSPP1Q1MSJ5 1256 aa14.42□□□□□ -0.1
USHBP1-201ENST00000252597 HDGFL1Q5TGJ6 251 aa14.41□□□□□ -0.1
USHBP1-201ENST00000252597 PUS7Q96PZ0 661 aaKnown RBP14.41□□□□□ -0.1
USHBP1-201ENST00000252597 SRCIN1Q9C0H9 1055 aa14.41□□□□□ -0.1
USHBP1-201ENST00000252597 PHF14O94880 888 aa14.41□□□□□ -0.1
USHBP1-201ENST00000252597 CCT4P50991 539 aaKnown RBP14.41□□□□□ -0.1
USHBP1-201ENST00000252597 NLRP6P59044 892 aa14.41□□□□□ -0.1
USHBP1-201ENST00000252597 CKAP2LQ8IYA6 745 aa14.41□□□□□ -0.1
USHBP1-201ENST00000252597 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.41□□□□□ -0.1
USHBP1-201ENST00000252597 CHL1O00533 1208 aa14.41□□□□□ -0.1
USHBP1-201ENST00000252597 AIMP1Q12904 312 aaKnown RBP14.41□□□□□ -0.1
USHBP1-201ENST00000252597 SIL1Q9H173 461 aa14.41□□□□□ -0.1
USHBP1-201ENST00000252597 FAM135BQ49AJ0 1406 aa14.4□□□□□ -0.1
USHBP1-201ENST00000252597 PRPF40BQ6NWY9 871 aaKnown RBP14.4□□□□□ -0.1
USHBP1-201ENST00000252597 PPP1R42Q7Z4L9 355 aa14.4□□□□□ -0.1
USHBP1-201ENST00000252597 JAKMIP1Q96N16 626 aaKnown RBP14.4□□□□□ -0.1
USHBP1-201ENST00000252597 TFIP11Q9UBB9 837 aaKnown RBP14.4□□□□□ -0.1
USHBP1-201ENST00000252597 DNM1Q05193 864 aaKnown RBP14.4□□□□□ -0.1
USHBP1-201ENST00000252597 WDR33Q9C0J8 1336 aaKnown RBP14.4□□□□□ -0.1
USHBP1-201ENST00000252597 VIRMAQ69YN4 1812 aaKnown RBP14.4□□□□□ -0.1
USHBP1-201ENST00000252597 CYP2E1P05181 493 aaPredicted RBP14.4□□□□□ -0.11
USHBP1-201ENST00000252597 GNAI3P08754 354 aa14.4□□□□□ -0.11
USHBP1-201ENST00000252597 FGD1P98174 961 aa14.4□□□□□ -0.11
USHBP1-201ENST00000252597 ACEP12821 1306 aa14.39□□□□□ -0.11
USHBP1-201ENST00000252597 TMEM2Q9UHN6 1383 aa14.39□□□□□ -0.11
USHBP1-201ENST00000252597 BRD1O95696 1058 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms