RNA–Protein interactions for RNA: ENST00000243914.7

CTCFL-201, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-201ENST00000243914 RGS12O14924 1447 aa13.78□□□□□ -0.2
CTCFL-201ENST00000243914 MYL6BP14649 208 aa13.78□□□□□ -0.2
CTCFL-201ENST00000243914 BRPF1P55201 1214 aaPredicted RBP13.78□□□□□ -0.2
CTCFL-201ENST00000243914 PRDM11Q9NQV5 511 aa13.78□□□□□ -0.2
CTCFL-201ENST00000243914 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
CTCFL-201ENST00000243914 RNMTO43148 476 aaKnown RBP13.77□□□□□ -0.2
CTCFL-201ENST00000243914 JARID2Q92833 1246 aaPredicted RBP13.77□□□□□ -0.2
CTCFL-201ENST00000243914 EIF4A1P60842 406 aaKnown RBP13.77□□□□□ -0.21
CTCFL-201ENST00000243914 CEP85Q6P2H3 762 aa13.77□□□□□ -0.21
CTCFL-201ENST00000243914 INTS3Q68E01 1043 aaKnown RBP13.77□□□□□ -0.21
CTCFL-201ENST00000243914 RGPD5Q99666 1765 aa13.76□□□□□ -0.21
CTCFL-201ENST00000243914 AKAP4Q5JQC9 854 aa13.76□□□□□ -0.21
CTCFL-201ENST00000243914 NPHP3Q7Z494 1330 aa13.76□□□□□ -0.21
CTCFL-201ENST00000243914 PI4KAP2A4QPH2 592 aa13.76□□□□□ -0.21
CTCFL-201ENST00000243914 PI4KAP1Q8N8J0 262 aa13.76□□□□□ -0.21
CTCFL-201ENST00000243914 DDX54Q8TDD1 881 aaKnown RBP13.76□□□□□ -0.21
CTCFL-201ENST00000243914 PNMA6EA0A0J9YXQ4 647 aa13.76□□□□□ -0.21
CTCFL-201ENST00000243914 LRRFIP2Q9Y608 721 aaKnown RBP13.76□□□□□ -0.21
CTCFL-201ENST00000243914 A0A0G2JS52 829 aa13.75□□□□□ -0.21
CTCFL-201ENST00000243914 AAMPQ13685 434 aa13.75□□□□□ -0.21
CTCFL-201ENST00000243914 TOM1L2Q6ZVM7 507 aa13.75□□□□□ -0.21
CTCFL-201ENST00000243914 RTL1A6NKG5 1358 aa13.74□□□□□ -0.21
CTCFL-201ENST00000243914 PTPRCP08575 1304 aa13.73□□□□□ -0.21
CTCFL-201ENST00000243914 NBPF7P0C2Y1 421 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-201ENST00000243914 TATP17735 454 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-201ENST00000243914 IL1RAPL2Q9NP60 686 aa13.73□□□□□ -0.21
CTCFL-201ENST00000243914 CWF19L2Q2TBE0 894 aaKnown RBP13.73□□□□□ -0.21
CTCFL-201ENST00000243914 UPF2Q9HAU5 1272 aaKnown RBP13.73□□□□□ -0.21
CTCFL-201ENST00000243914 MED1Q15648 1581 aaPredicted RBP13.73□□□□□ -0.21
CTCFL-201ENST00000243914 HTATSF1O43719 755 aaKnown RBP13.72□□□□□ -0.21
CTCFL-201ENST00000243914 RTL5Q5HYW3 569 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-201ENST00000243914 SPATA31A3Q5VYP0 1347 aa13.72□□□□□ -0.21
CTCFL-201ENST00000243914 ANKRD44Q8N8A2 993 aa13.72□□□□□ -0.21
CTCFL-201ENST00000243914 ZNF330Q9Y3S2 320 aaPredicted RBP13.72□□□□□ -0.21
CTCFL-201ENST00000243914 GOLGB1Q14789 3259 aaKnown RBP13.72□□□□□ -0.21
CTCFL-201ENST00000243914 CYP27B1O15528 508 aa13.72□□□□□ -0.21
CTCFL-201ENST00000243914 AMOTQ4VCS5 1084 aa13.71□□□□□ -0.21
CTCFL-201ENST00000243914 GCC1Q96CN9 775 aa13.71□□□□□ -0.21
CTCFL-201ENST00000243914 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.22
CTCFL-201ENST00000243914 PTCD1O75127 700 aaKnown RBP13.71□□□□□ -0.22
CTCFL-201ENST00000243914 MAP4K4O95819 1239 aaPredicted RBP13.71□□□□□ -0.22
CTCFL-201ENST00000243914 GSPT1P15170 499 aaKnown RBP13.71□□□□□ -0.22
CTCFL-201ENST00000243914 USP44Q9H0E7 712 aa13.71□□□□□ -0.22
CTCFL-201ENST00000243914 FOXD4L1Q9NU39 408 aa13.71□□□□□ -0.22
CTCFL-201ENST00000243914 EVA1CP58658 441 aa13.7□□□□□ -0.22
CTCFL-201ENST00000243914 LARP1Q6PKG0 1096 aaKnown RBP13.7□□□□□ -0.22
CTCFL-201ENST00000243914 DDRGK1Q96HY6 314 aa13.7□□□□□ -0.22
CTCFL-201ENST00000243914 C22orf23Q9BZE7 217 aa13.7□□□□□ -0.22
CTCFL-201ENST00000243914 GNAI2P04899 355 aa13.7□□□□□ -0.22
CTCFL-201ENST00000243914 ARXQ96QS3 562 aa13.7□□□□□ -0.22
CTCFL-201ENST00000243914 DCTPP1Q9H773 170 aa13.7□□□□□ -0.22
CTCFL-201ENST00000243914 CCT4P50991 539 aaKnown RBP13.7□□□□□ -0.22
CTCFL-201ENST00000243914 PLEKHM2Q8IWE5 1019 aa13.7□□□□□ -0.22
CTCFL-201ENST00000243914 CEMIPQ8WUJ3 1361 aa13.69□□□□□ -0.22
CTCFL-201ENST00000243914 LMTK3Q96Q04 1460 aa13.69□□□□□ -0.22
CTCFL-201ENST00000243914 MEGF6O75095 1541 aa13.69□□□□□ -0.22
CTCFL-201ENST00000243914 GIGYF1O75420 1035 aaPredicted RBP13.69□□□□□ -0.22
CTCFL-201ENST00000243914 ZNF496Q96IT1 587 aaPredicted RBP13.69□□□□□ -0.22
CTCFL-201ENST00000243914 RBM42Q9BTD8 480 aaKnown RBP13.69□□□□□ -0.22
CTCFL-201ENST00000243914 MAP3K2Q9Y2U5 619 aa13.69□□□□□ -0.22
CTCFL-201ENST00000243914 USP16Q9Y5T5 823 aa13.69□□□□□ -0.22
CTCFL-201ENST00000243914 ATP10DQ9P241 1426 aa13.69□□□□□ -0.22
CTCFL-201ENST00000243914 UBTFL1P0CB47 393 aaPredicted RBP13.69□□□□□ -0.22
CTCFL-201ENST00000243914 PHKG2P15735 406 aa13.69□□□□□ -0.22
CTCFL-201ENST00000243914 CHMP4BQ9H444 224 aaKnown RBP13.68□□□□□ -0.22
CTCFL-201ENST00000243914 TBC1D9Q6ZT07 1266 aa13.68□□□□□ -0.22
CTCFL-201ENST00000243914 NUTM1Q86Y26 1132 aa13.68□□□□□ -0.22
CTCFL-201ENST00000243914 SRCIN1Q9C0H9 1055 aa13.67□□□□□ -0.22
CTCFL-201ENST00000243914 TNS3Q68CZ2 1445 aa13.67□□□□□ -0.22
CTCFL-201ENST00000243914 ZNF790Q6PG37 636 aa13.67□□□□□ -0.22
CTCFL-201ENST00000243914 TBC1D32Q96NH3 1257 aa13.67□□□□□ -0.22
CTCFL-201ENST00000243914 PIP4K2BP78356 416 aa13.67□□□□□ -0.22
CTCFL-201ENST00000243914 RPAP2Q8IXW5 612 aaPredicted RBP13.67□□□□□ -0.22
CTCFL-201ENST00000243914 DNAAF4Q8WXU2 420 aa13.67□□□□□ -0.22
CTCFL-201ENST00000243914 ADAMTS2O95450 1211 aa13.66□□□□□ -0.22
CTCFL-201ENST00000243914 PPP1R42Q7Z4L9 355 aa13.66□□□□□ -0.22
CTCFL-201ENST00000243914 TRPM3Q9HCF6 1732 aaPredicted RBP13.66□□□□□ -0.22
CTCFL-201ENST00000243914 SRGAP3O43295 1099 aa13.66□□□□□ -0.22
CTCFL-201ENST00000243914 SURF6O75683 361 aaKnown RBP13.66□□□□□ -0.22
CTCFL-201ENST00000243914 CABP4P57796 275 aa13.66□□□□□ -0.22
CTCFL-201ENST00000243914 PA2G4Q9UQ80 394 aaKnown RBP13.66□□□□□ -0.22
CTCFL-201ENST00000243914 SPG7Q9UQ90 795 aa13.66□□□□□ -0.22
CTCFL-201ENST00000243914 IFNL2Q8IZJ0 200 aa13.66□□□□□ -0.22
CTCFL-201ENST00000243914 KLHDC4Q8TBB5 520 aa13.66□□□□□ -0.22
CTCFL-201ENST00000243914 SLC52A2Q9HAB3 445 aa13.66□□□□□ -0.22
CTCFL-201ENST00000243914 ATP5J2-PTCD1G3V325 749 aa13.65□□□□□ -0.22
CTCFL-201ENST00000243914 TTC5Q8N0Z6 440 aa13.65□□□□□ -0.22
CTCFL-201ENST00000243914 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
CTCFL-201ENST00000243914 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.65□□□□□ -0.22
CTCFL-201ENST00000243914 RILPL2Q969X0 211 aa13.65□□□□□ -0.22
CTCFL-201ENST00000243914 TBC1D2Q9BYX2 928 aa13.65□□□□□ -0.22
CTCFL-201ENST00000243914 CCDC9Q9Y3X0 531 aaKnown RBP13.65□□□□□ -0.22
CTCFL-201ENST00000243914 SLIT3O75094 1523 aa13.65□□□□□ -0.22
CTCFL-201ENST00000243914 NUTM2BA6NNL0 878 aaPredicted RBP13.65□□□□□ -0.23
CTCFL-201ENST00000243914 NUTM2EB1AL46 878 aaPredicted RBP13.65□□□□□ -0.23
CTCFL-201ENST00000243914 NUTM2AQ8IVF1 878 aaPredicted RBP13.65□□□□□ -0.23
CTCFL-201ENST00000243914 BTG4Q9NY30 223 aa13.65□□□□□ -0.23
CTCFL-201ENST00000243914 SYTL4Q96C24 671 aaPredicted RBP13.64□□□□□ -0.23
CTCFL-201ENST00000243914 SIL1Q9H173 461 aa13.64□□□□□ -0.23
CTCFL-201ENST00000243914 DBF4Q9UBU7 674 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms