RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TPM3P06753 285 aa13.09□□□□□ -0.31
COPA-201ENST00000241704 FSD1Q9BTV5 496 aa13.09□□□□□ -0.31
COPA-201ENST00000241704 MBIPQ9NS73 344 aa13.09□□□□□ -0.31
COPA-201ENST00000241704 ZCCHC11Q5TAX3 1644 aaKnown RBP13.09□□□□□ -0.31
COPA-201ENST00000241704 YEATS2Q9ULM3 1422 aa13.09□□□□□ -0.31
COPA-201ENST00000241704 MLH3Q9UHC1 1453 aa13.09□□□□□ -0.31
COPA-201ENST00000241704 SSFA2P28290 1259 aa13.09□□□□□ -0.31
COPA-201ENST00000241704 CHRNA2Q15822 529 aa13.09□□□□□ -0.31
COPA-201ENST00000241704 FAM83GA6ND36 823 aa13.08□□□□□ -0.31
COPA-201ENST00000241704 GNL3LQ9NVN8 582 aaKnown RBP13.08□□□□□ -0.31
COPA-201ENST00000241704 ZRANB1Q9UGI0 708 aa13.08□□□□□ -0.31
COPA-201ENST00000241704 ZFYVE16Q7Z3T8 1539 aa13.08□□□□□ -0.32
COPA-201ENST00000241704 HIP1O00291 1037 aa13.08□□□□□ -0.32
COPA-201ENST00000241704 RALYLQ86SE5 291 aaKnown RBP13.08□□□□□ -0.32
COPA-201ENST00000241704 SPDYE4A6NLX3 237 aa13.08□□□□□ -0.32
COPA-201ENST00000241704 NFXL1Q6ZNB6 911 aa13.08□□□□□ -0.32
COPA-201ENST00000241704 ZPR1O75312 459 aa13.07□□□□□ -0.32
COPA-201ENST00000241704 KCNA6P17658 529 aa13.07□□□□□ -0.32
COPA-201ENST00000241704 MAPK8IP2Q13387 824 aaPredicted RBP13.07□□□□□ -0.32
COPA-201ENST00000241704 ERCC6L2Q5T890 1561 aa13.07□□□□□ -0.32
COPA-201ENST00000241704 ZNF500O60304 480 aaPredicted RBP13.07□□□□□ -0.32
COPA-201ENST00000241704 RAB3GAP1Q15042 981 aa13.07□□□□□ -0.32
COPA-201ENST00000241704 ZFYVE9O95405 1425 aa13.07□□□□□ -0.32
COPA-201ENST00000241704 PTPRCP08575 1304 aa13.07□□□□□ -0.32
COPA-201ENST00000241704 EIF4A2Q14240 407 aaKnown RBP13.07□□□□□ -0.32
COPA-201ENST00000241704 CCDC57Q2TAC2 916 aa13.07□□□□□ -0.32
COPA-201ENST00000241704 BAG4O95429 457 aaKnown RBP13.07□□□□□ -0.32
COPA-201ENST00000241704 TRIM29Q14134 588 aa13.06□□□□□ -0.32
COPA-201ENST00000241704 RABEP1Q15276 862 aa13.06□□□□□ -0.32
COPA-201ENST00000241704 ZSCAN23Q3MJ62 389 aa13.06□□□□□ -0.32
COPA-201ENST00000241704 C19orf44Q9H6X5 657 aa13.06□□□□□ -0.32
COPA-201ENST00000241704 ZNF652Q9Y2D9 606 aa13.06□□□□□ -0.32
COPA-201ENST00000241704 NCKAP5LQ9HCH0 1330 aa13.06□□□□□ -0.32
COPA-201ENST00000241704 TSPYL1Q9H0U9 437 aa13.06□□□□□ -0.32
COPA-201ENST00000241704 KDM5DQ9BY66 1539 aa13.06□□□□□ -0.32
COPA-201ENST00000241704 SYCE3A1L190 88 aa13.05□□□□□ -0.32
COPA-201ENST00000241704 SMC5Q8IY18 1101 aa13.05□□□□□ -0.32
COPA-201ENST00000241704 ANKRD24Q8TF21 1146 aa13.05□□□□□ -0.32
COPA-201ENST00000241704 SNX21Q969T3 373 aa13.05□□□□□ -0.32
COPA-201ENST00000241704 C8orf37Q96NL8 207 aa13.05□□□□□ -0.32
COPA-201ENST00000241704 RBM25P49756 843 aaKnown RBP13.05□□□□□ -0.32
COPA-201ENST00000241704 TEX35Q5T0J7 233 aa13.05□□□□□ -0.32
COPA-201ENST00000241704 GAS2L3Q86XJ1 694 aa13.05□□□□□ -0.32
COPA-201ENST00000241704 ARHGAP45Q92619 1136 aa13.05□□□□□ -0.32
COPA-201ENST00000241704 SMC3Q9UQE7 1217 aa13.05□□□□□ -0.32
COPA-201ENST00000241704 TRPM2O94759 1503 aa13.05□□□□□ -0.32
COPA-201ENST00000241704 FOXD4L6Q3SYB3 417 aaPredicted RBP13.05□□□□□ -0.32
COPA-201ENST00000241704 LARP1Q6PKG0 1096 aaKnown RBP13.05□□□□□ -0.32
COPA-201ENST00000241704 FOXD4L3Q6VB84 417 aaPredicted RBP13.05□□□□□ -0.32
COPA-201ENST00000241704 DBF4Q9UBU7 674 aaPredicted RBP13.05□□□□□ -0.32
COPA-201ENST00000241704 PRDM4Q9UKN5 801 aa13.05□□□□□ -0.32
COPA-201ENST00000241704 PSMA5P28066 241 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 DNAJC2Q99543 621 aaKnown RBP13.04□□□□□ -0.32
COPA-201ENST00000241704 PLEKHH1Q9ULM0 1364 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 MCM2P49736 904 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 FLIIQ13045 1269 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 IKQ13123 557 aaPredicted RBP13.04□□□□□ -0.32
COPA-201ENST00000241704 CCDC158Q5M9N0 1113 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 MPNDQ8N594 471 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 SIL1Q9H173 461 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 CALCOCO1Q9P1Z2 691 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 FLT4P35916 1363 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 SBNO2Q9Y2G9 1366 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 F6X3S4 739 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 CREBRFQ8IUR6 639 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 NEK4P51957 841 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 AEBP1Q8IUX7 1158 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 EXOC6BQ9Y2D4 811 aa13.04□□□□□ -0.32
COPA-201ENST00000241704 CCAR1Q8IX12 1150 aaKnown RBP13.03□□□□□ -0.32
COPA-201ENST00000241704 PTPRTO14522 1441 aa13.03□□□□□ -0.32
COPA-201ENST00000241704 TMEM2Q9UHN6 1383 aa13.03□□□□□ -0.32
COPA-201ENST00000241704 IFNL2Q8IZJ0 200 aa13.03□□□□□ -0.32
COPA-201ENST00000241704 PLCD3Q8N3E9 789 aa13.03□□□□□ -0.32
COPA-201ENST00000241704 MYRIPQ8NFW9 859 aa13.03□□□□□ -0.32
COPA-201ENST00000241704 MTMR7Q9Y216 660 aa13.03□□□□□ -0.32
COPA-201ENST00000241704 DNAAF4Q8WXU2 420 aa13.03□□□□□ -0.32
COPA-201ENST00000241704 IL1RAPL2Q9NP60 686 aa13.03□□□□□ -0.32
COPA-201ENST00000241704 LMTK3Q96Q04 1460 aa13.03□□□□□ -0.32
COPA-201ENST00000241704 TIGD1Q96MW7 591 aa13.03□□□□□ -0.32
COPA-201ENST00000241704 IPO4Q8TEX9 1081 aaKnown RBP13.02□□□□□ -0.32
COPA-201ENST00000241704 ZNF592Q92610 1267 aa13.02□□□□□ -0.32
COPA-201ENST00000241704 CCDC85AQ96PX6 553 aaPredicted RBP13.02□□□□□ -0.32
COPA-201ENST00000241704 HYPKQ9NX55 129 aa13.02□□□□□ -0.32
COPA-201ENST00000241704 MAGI2Q86UL8 1455 aa13.02□□□□□ -0.32
COPA-201ENST00000241704 ADCY10Q96PN6 1610 aa13.02□□□□□ -0.33
COPA-201ENST00000241704 TPM4P67936 248 aa13.02□□□□□ -0.33
COPA-201ENST00000241704 GOLGA6L1Q8N7Z2 621 aa13.02□□□□□ -0.33
COPA-201ENST00000241704 INSRP06213 1382 aa13.02□□□□□ -0.33
COPA-201ENST00000241704 RBM5P52756 815 aaKnown RBP eCLIP13.02□□□□□ -0.33
COPA-201ENST00000241704 SIRT1Q96EB6 747 aa13.02□□□□□ -0.33
COPA-201ENST00000241704 CEP126Q9P2H0 1117 aa13.02□□□□□ -0.33
COPA-201ENST00000241704 CFAP65Q6ZU64 1925 aaKnown RBP13.01□□□□□ -0.33
COPA-201ENST00000241704 KIF1BPQ96EK5 621 aa13.01□□□□□ -0.33
COPA-201ENST00000241704 EDC4Q6P2E9 1401 aaKnown RBP13.01□□□□□ -0.33
COPA-201ENST00000241704 RAB11FIP3O75154 756 aa13.01□□□□□ -0.33
COPA-201ENST00000241704 AACSQ86V21 672 aa13.01□□□□□ -0.33
COPA-201ENST00000241704 TTC39AQ5SRH9 613 aa13.01□□□□□ -0.33
COPA-201ENST00000241704 IGHMBP2P38935 993 aaKnown RBP13.01□□□□□ -0.33
COPA-201ENST00000241704 LRSAM1Q6UWE0 723 aa13.01□□□□□ -0.33
COPA-201ENST00000241704 FMNL2Q96PY5 1086 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms