RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 GBP4Q96PP9 640 aa11.26□□□□□ -0.61
SYDE2-201ENST00000234668 SBNO1A3KN83 1393 aa11.26□□□□□ -0.61
SYDE2-201ENST00000234668 IGSF1Q8N6C5 1336 aa11.25□□□□□ -0.61
SYDE2-201ENST00000234668 HMMRO75330 724 aa11.25□□□□□ -0.61
SYDE2-201ENST00000234668 CCT4P50991 539 aaKnown RBP11.25□□□□□ -0.61
SYDE2-201ENST00000234668 ESCO1Q5FWF5 840 aa11.25□□□□□ -0.61
SYDE2-201ENST00000234668 HDGFL1Q5TGJ6 251 aa11.25□□□□□ -0.61
SYDE2-201ENST00000234668 CCDC30Q5VVM6 783 aa11.25□□□□□ -0.61
SYDE2-201ENST00000234668 NBPF6Q5VWK0 638 aa11.25□□□□□ -0.61
SYDE2-201ENST00000234668 NBPF4Q96M43 638 aa11.25□□□□□ -0.61
SYDE2-201ENST00000234668 LARP6Q9BRS8 491 aaKnown RBP11.25□□□□□ -0.61
SYDE2-201ENST00000234668 MPRIPQ6WCQ1 1025 aa11.25□□□□□ -0.61
SYDE2-201ENST00000234668 MON2Q7Z3U7 1717 aa11.25□□□□□ -0.61
SYDE2-201ENST00000234668 NEK4P51957 841 aa11.25□□□□□ -0.61
SYDE2-201ENST00000234668 TAF7Q15545 349 aaPredicted RBP11.25□□□□□ -0.61
SYDE2-201ENST00000234668 GRPEL1Q9HAV7 217 aa11.25□□□□□ -0.61
SYDE2-201ENST00000234668 PALD1Q9ULE6 856 aa11.25□□□□□ -0.61
SYDE2-201ENST00000234668 TTC21AQ8NDW8 1320 aa11.24□□□□□ -0.61
SYDE2-201ENST00000234668 REREQ9P2R6 1566 aa11.24□□□□□ -0.61
SYDE2-201ENST00000234668 BAG4O95429 457 aaKnown RBP11.24□□□□□ -0.61
SYDE2-201ENST00000234668 RABEP1Q15276 862 aa11.24□□□□□ -0.61
SYDE2-201ENST00000234668 CASC1Q6TDU7 716 aa11.24□□□□□ -0.61
SYDE2-201ENST00000234668 USP44Q9H0E7 712 aa11.24□□□□□ -0.61
SYDE2-201ENST00000234668 ANO2Q9NQ90 1003 aa11.24□□□□□ -0.61
SYDE2-201ENST00000234668 DDX49Q9Y6V7 483 aaKnown RBP11.24□□□□□ -0.61
SYDE2-201ENST00000234668 SSH2Q76I76 1423 aa11.24□□□□□ -0.61
SYDE2-201ENST00000234668 NCOA3Q9Y6Q9 1424 aa11.24□□□□□ -0.61
SYDE2-201ENST00000234668 UPF3BQ9BZI7 483 aaKnown RBP11.24□□□□□ -0.61
SYDE2-201ENST00000234668 LRRCC1Q9C099 1032 aa11.24□□□□□ -0.61
SYDE2-201ENST00000234668 IL25Q9H293 177 aa11.24□□□□□ -0.61
SYDE2-201ENST00000234668 ERC2O15083 957 aa11.23□□□□□ -0.61
SYDE2-201ENST00000234668 PSME1Q06323 249 aa11.23□□□□□ -0.61
SYDE2-201ENST00000234668 ITSN1Q15811 1721 aa11.23□□□□□ -0.61
SYDE2-201ENST00000234668 ARHGEF10O15013 1369 aa11.23□□□□□ -0.61
SYDE2-201ENST00000234668 SURF6O75683 361 aaKnown RBP11.23□□□□□ -0.61
SYDE2-201ENST00000234668 NBPF7P0C2Y1 421 aaPredicted RBP11.23□□□□□ -0.61
SYDE2-201ENST00000234668 PRAMEF22A3QJZ6 481 aa11.22□□□□□ -0.61
SYDE2-201ENST00000234668 CHPF2Q9P2E5 772 aa11.22□□□□□ -0.61
SYDE2-201ENST00000234668 UBR1Q8IWV7 1749 aa11.22□□□□□ -0.61
SYDE2-201ENST00000234668 RGPD8O14715 1765 aaPredicted RBP11.22□□□□□ -0.61
SYDE2-201ENST00000234668 UBTFL1P0CB47 393 aaPredicted RBP11.22□□□□□ -0.61
SYDE2-201ENST00000234668 MX1P20591 662 aa11.22□□□□□ -0.61
SYDE2-201ENST00000234668 ATP8B2P98198 1209 aa11.22□□□□□ -0.61
SYDE2-201ENST00000234668 CIZ1Q9ULV3 898 aaPredicted RBP11.22□□□□□ -0.61
SYDE2-201ENST00000234668 PHF8Q9UPP1 1060 aa11.22□□□□□ -0.61
SYDE2-201ENST00000234668 AKAP12Q02952 1782 aa11.22□□□□□ -0.61
SYDE2-201ENST00000234668 KIF24Q5T7B8 1368 aa11.22□□□□□ -0.61
SYDE2-201ENST00000234668 PI4KAP2A4QPH2 592 aa11.22□□□□□ -0.61
SYDE2-201ENST00000234668 PRPF40AO75400 957 aaKnown RBP11.22□□□□□ -0.61
SYDE2-201ENST00000234668 PPP1R42Q7Z4L9 355 aa11.22□□□□□ -0.61
SYDE2-201ENST00000234668 FAM43AQ8N2R8 423 aa11.22□□□□□ -0.61
SYDE2-201ENST00000234668 PI4KAP1Q8N8J0 262 aa11.22□□□□□ -0.61
SYDE2-201ENST00000234668 ORAI2Q96SN7 254 aa11.22□□□□□ -0.61
SYDE2-201ENST00000234668 RBM27Q9P2N5 1060 aaKnown RBP11.21□□□□□ -0.61
SYDE2-201ENST00000234668 REC8O95072 547 aa11.21□□□□□ -0.62
SYDE2-201ENST00000234668 CAVIN1Q6NZI2 390 aaKnown RBP11.21□□□□□ -0.62
SYDE2-201ENST00000234668 SRGAP3O43295 1099 aa11.2□□□□□ -0.62
SYDE2-201ENST00000234668 GNAI3P08754 354 aa11.2□□□□□ -0.62
SYDE2-201ENST00000234668 MRE11P49959 708 aa11.2□□□□□ -0.62
SYDE2-201ENST00000234668 KDRP35968 1356 aa11.2□□□□□ -0.62
SYDE2-201ENST00000234668 ST18O60284 1047 aa11.2□□□□□ -0.62
SYDE2-201ENST00000234668 DDX54Q8TDD1 881 aaKnown RBP11.2□□□□□ -0.62
SYDE2-201ENST00000234668 ZDHHC9Q9Y397 364 aa11.2□□□□□ -0.62
SYDE2-201ENST00000234668 ESYT1Q9BSJ8 1104 aa11.19□□□□□ -0.62
SYDE2-201ENST00000234668 CHMLP26374 656 aa11.19□□□□□ -0.62
SYDE2-201ENST00000234668 AIMP1Q12904 312 aaKnown RBP11.19□□□□□ -0.62
SYDE2-201ENST00000234668 ZNF530Q6P9A1 599 aaPredicted RBP11.19□□□□□ -0.62
SYDE2-201ENST00000234668 MAP3K5Q99683 1374 aa11.19□□□□□ -0.62
SYDE2-201ENST00000234668 KIF13AQ9H1H9 1805 aa11.19□□□□□ -0.62
SYDE2-201ENST00000234668 PROSER3Q2NL68 480 aa11.19□□□□□ -0.62
SYDE2-201ENST00000234668 TMX3Q96JJ7 454 aa11.19□□□□□ -0.62
SYDE2-201ENST00000234668 NSFL1CQ9UNZ2 370 aaKnown RBP11.19□□□□□ -0.62
SYDE2-201ENST00000234668 GOLGA6L22H0YM25 854 aa11.18□□□□□ -0.62
SYDE2-201ENST00000234668 TEFQ10587 303 aa11.18□□□□□ -0.62
SYDE2-201ENST00000234668 SRCIN1Q9C0H9 1055 aa11.18□□□□□ -0.62
SYDE2-201ENST00000234668 PA2G4Q9UQ80 394 aaKnown RBP11.18□□□□□ -0.62
SYDE2-201ENST00000234668 BTBD11A6QL63 1104 aa11.18□□□□□ -0.62
SYDE2-201ENST00000234668 CPA1P15085 419 aa11.18□□□□□ -0.62
SYDE2-201ENST00000234668 SOS1Q07889 1333 aaPredicted RBP11.18□□□□□ -0.62
SYDE2-201ENST00000234668 JARID2Q92833 1246 aaPredicted RBP11.18□□□□□ -0.62
SYDE2-201ENST00000234668 GDPD2Q9HCC8 539 aa11.18□□□□□ -0.62
SYDE2-201ENST00000234668 PIP4K2AP48426 406 aaPredicted RBP11.17□□□□□ -0.62
SYDE2-201ENST00000234668 EIF4A1P60842 406 aaKnown RBP11.17□□□□□ -0.62
SYDE2-201ENST00000234668 OS9Q13438 667 aaPredicted RBP11.17□□□□□ -0.62
SYDE2-201ENST00000234668 DDX17Q92841 729 aaKnown RBP11.17□□□□□ -0.62
SYDE2-201ENST00000234668 ZC3H6P61129 1189 aaKnown RBP11.17□□□□□ -0.62
SYDE2-201ENST00000234668 CWF19L2Q2TBE0 894 aaKnown RBP11.17□□□□□ -0.62
SYDE2-201ENST00000234668 ERBB4Q15303 1308 aa11.17□□□□□ -0.62
SYDE2-201ENST00000234668 IP6K1Q92551 441 aa11.17□□□□□ -0.62
SYDE2-201ENST00000234668 OSBPL3Q9H4L5 887 aa11.17□□□□□ -0.62
SYDE2-201ENST00000234668 LMBRD1Q9NUN5 540 aa11.17□□□□□ -0.62
SYDE2-201ENST00000234668 SPG7Q9UQ90 795 aa11.17□□□□□ -0.62
SYDE2-201ENST00000234668 DIP2AQ14689 1571 aa11.16□□□□□ -0.62
SYDE2-201ENST00000234668 AXIN2Q9Y2T1 843 aa11.16□□□□□ -0.62
SYDE2-201ENST00000234668 NRKQ7Z2Y5 1582 aa11.16□□□□□ -0.62
SYDE2-201ENST00000234668 SALL3Q9BXA9 1300 aa11.16□□□□□ -0.62
SYDE2-201ENST00000234668 SLC39A6Q13433 755 aa11.16□□□□□ -0.62
SYDE2-201ENST00000234668 CWC27Q6UX04 472 aaKnown RBP11.16□□□□□ -0.62
SYDE2-201ENST00000234668 RHPN1Q8TCX5 695 aa11.16□□□□□ -0.62
SYDE2-201ENST00000234668 IBTKQ9P2D0 1353 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms