RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 MTHFSDQ2M296 383 aaKnown RBP12.58□□□□□ -0.4
USP11-201ENST00000218348 SPRYD3Q8NCJ5 442 aa12.58□□□□□ -0.4
USP11-201ENST00000218348 KCNH5Q8NCM2 988 aa12.58□□□□□ -0.4
USP11-201ENST00000218348 EYA1Q99502 592 aa12.58□□□□□ -0.4
USP11-201ENST00000218348 DLG5Q8TDM6 1919 aa12.58□□□□□ -0.4
USP11-201ENST00000218348 SLC4A10Q6U841 1118 aa12.57□□□□□ -0.4
USP11-201ENST00000218348 RTF1Q92541 710 aaKnown RBP12.57□□□□□ -0.4
USP11-201ENST00000218348 IL16Q14005 1332 aa12.57□□□□□ -0.4
USP11-201ENST00000218348 LRRC37A3O60309 1634 aa12.57□□□□□ -0.4
USP11-201ENST00000218348 CFAP44Q96MT7 982 aa12.57□□□□□ -0.4
USP11-201ENST00000218348 KIF16BQ96L93 1317 aa12.57□□□□□ -0.4
USP11-201ENST00000218348 DISP2A7MBM2 1401 aa12.57□□□□□ -0.4
USP11-201ENST00000218348 IP6K1Q92551 441 aa12.57□□□□□ -0.4
USP11-201ENST00000218348 MRPL50Q8N5N7 158 aaKnown RBP12.56□□□□□ -0.4
USP11-201ENST00000218348 IFT57Q9NWB7 429 aa12.56□□□□□ -0.4
USP11-201ENST00000218348 ZNF428Q96B54 188 aa12.56□□□□□ -0.4
USP11-201ENST00000218348 CALD1Q05682 793 aaKnown RBP12.55□□□□□ -0.4
USP11-201ENST00000218348 LMOD3Q0VAK6 560 aa12.55□□□□□ -0.4
USP11-201ENST00000218348 ANKRD45Q5TZF3 282 aa12.55□□□□□ -0.4
USP11-201ENST00000218348 TSPYL4Q9UJ04 414 aa12.55□□□□□ -0.4
USP11-201ENST00000218348 ERBB3P21860 1342 aa12.55□□□□□ -0.4
USP11-201ENST00000218348 SIPA1L3O60292 1781 aaPredicted RBP12.55□□□□□ -0.4
USP11-201ENST00000218348 MFAP1P55081 439 aaKnown RBP12.55□□□□□ -0.4
USP11-201ENST00000218348 F6X3S4 739 aa12.54□□□□□ -0.4
USP11-201ENST00000218348 ZBTB40Q9NUA8 1239 aa12.54□□□□□ -0.4
USP11-201ENST00000218348 EP400Q96L91 3159 aa12.54□□□□□ -0.4
USP11-201ENST00000218348 IGSF1Q8N6C5 1336 aa12.54□□□□□ -0.4
USP11-201ENST00000218348 PLEKHG2Q9H7P9 1386 aa12.54□□□□□ -0.4
USP11-201ENST00000218348 CT47B1P0C2W7 299 aaPredicted RBP12.54□□□□□ -0.4
USP11-201ENST00000218348 CHMP4BQ9H444 224 aaKnown RBP12.54□□□□□ -0.4
USP11-201ENST00000218348 FNBP4Q8N3X1 1017 aaPredicted RBP12.54□□□□□ -0.4
USP11-201ENST00000218348 ATRNO75882 1429 aa12.53□□□□□ -0.4
USP11-201ENST00000218348 SLC4A2P04920 1241 aa12.53□□□□□ -0.4
USP11-201ENST00000218348 TOGARAM1Q9Y4F4 1720 aa12.53□□□□□ -0.4
USP11-201ENST00000218348 ZNF853P0CG23 659 aa12.52□□□□□ -0.4
USP11-201ENST00000218348 ALDH1L2Q3SY69 923 aa12.52□□□□□ -0.4
USP11-201ENST00000218348 SLKQ9H2G2 1235 aaPredicted RBP12.52□□□□□ -0.41
USP11-201ENST00000218348 G2E3Q7L622 706 aa12.52□□□□□ -0.41
USP11-201ENST00000218348 MEGF6O75095 1541 aa12.51□□□□□ -0.41
USP11-201ENST00000218348 ZBTB7BO15156 539 aaPredicted RBP12.5□□□□□ -0.41
USP11-201ENST00000218348 ZC3H6P61129 1189 aaKnown RBP12.5□□□□□ -0.41
USP11-201ENST00000218348 DDRGK1Q96HY6 314 aa12.5□□□□□ -0.41
USP11-201ENST00000218348 BRWD3Q6RI45 1802 aa12.5□□□□□ -0.41
USP11-201ENST00000218348 CRB1P82279 1406 aa12.5□□□□□ -0.41
USP11-201ENST00000218348 EIF2S2P20042 333 aaKnown RBP12.49□□□□□ -0.41
USP11-201ENST00000218348 SCN11AQ9UI33 1791 aa12.49□□□□□ -0.41
USP11-201ENST00000218348 WDR17Q8IZU2 1322 aa12.49□□□□□ -0.41
USP11-201ENST00000218348 PAPPAQ13219 1627 aa12.49□□□□□ -0.41
USP11-201ENST00000218348 HSP90AA2PQ14568 343 aaPredicted RBP12.49□□□□□ -0.41
USP11-201ENST00000218348 CHRNA2Q15822 529 aa12.49□□□□□ -0.41
USP11-201ENST00000218348 CHL1O00533 1208 aa12.48□□□□□ -0.41
USP11-201ENST00000218348 SIRT2Q8IXJ6 389 aa12.48□□□□□ -0.41
USP11-201ENST00000218348 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
USP11-201ENST00000218348 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
USP11-201ENST00000218348 UPF2Q9HAU5 1272 aaKnown RBP12.48□□□□□ -0.41
USP11-201ENST00000218348 RGS17Q9UGC6 210 aaPredicted RBP12.48□□□□□ -0.41
USP11-201ENST00000218348 OVOS2A0A0G2JMS6 1433 aa12.47□□□□□ -0.41
USP11-201ENST00000218348 ANXA1P04083 346 aa12.47□□□□□ -0.41
USP11-201ENST00000218348 C16orf71Q8IYS4 520 aaPredicted RBP12.47□□□□□ -0.41
USP11-201ENST00000218348 NAP1L2Q9ULW6 460 aaPredicted RBP12.47□□□□□ -0.41
USP11-201ENST00000218348 SMARCA5O60264 1052 aaPredicted RBP12.47□□□□□ -0.41
USP11-201ENST00000218348 MEIS3Q99687 375 aa12.47□□□□□ -0.41
USP11-201ENST00000218348 HDAC1Q13547 482 aaPredicted RBP12.46□□□□□ -0.41
USP11-201ENST00000218348 CHD1LQ86WJ1 897 aa12.46□□□□□ -0.41
USP11-201ENST00000218348 API5Q9BZZ5 524 aaKnown RBP12.46□□□□□ -0.41
USP11-201ENST00000218348 LGR6Q9HBX8 967 aa12.46□□□□□ -0.41
USP11-201ENST00000218348 SBF2Q86WG5 1849 aa12.46□□□□□ -0.41
USP11-201ENST00000218348 MPRIPQ6WCQ1 1025 aa12.46□□□□□ -0.42
USP11-201ENST00000218348 IL17REQ8NFR9 667 aa12.46□□□□□ -0.42
USP11-201ENST00000218348 ANKRD24Q8TF21 1146 aa12.46□□□□□ -0.42
USP11-201ENST00000218348 FKBP5Q13451 457 aaPredicted RBP12.45□□□□□ -0.42
USP11-201ENST00000218348 BBXQ8WY36 941 aaPredicted RBP12.45□□□□□ -0.42
USP11-201ENST00000218348 MRC1P22897 1456 aa12.45□□□□□ -0.42
USP11-201ENST00000218348 GNAT3A8MTJ3 354 aa12.45□□□□□ -0.42
USP11-201ENST00000218348 HAP1P54257 671 aaPredicted RBP12.45□□□□□ -0.42
USP11-201ENST00000218348 SPATA31A5Q5VU36 1347 aa12.45□□□□□ -0.42
USP11-201ENST00000218348 SPATA31A7Q8IWB4 1347 aa12.45□□□□□ -0.42
USP11-201ENST00000218348 SMC5Q8IY18 1101 aa12.45□□□□□ -0.42
USP11-201ENST00000218348 CHMP4AQ9BY43 222 aa12.45□□□□□ -0.42
USP11-201ENST00000218348 ILDR1Q86SU0 546 aaPredicted RBP12.44□□□□□ -0.42
USP11-201ENST00000218348 GAS2L2Q8NHY3 880 aa12.44□□□□□ -0.42
USP11-201ENST00000218348 OTUD7AQ8TE49 926 aaPredicted RBP12.44□□□□□ -0.42
USP11-201ENST00000218348 SPATA31A1Q5TZJ5 1347 aa12.44□□□□□ -0.42
USP11-201ENST00000218348 KCNQ3O43525 872 aa12.44□□□□□ -0.42
USP11-201ENST00000218348 LARP1Q6PKG0 1096 aaKnown RBP12.44□□□□□ -0.42
USP11-201ENST00000218348 BTG4Q9NY30 223 aa12.44□□□□□ -0.42
USP11-201ENST00000218348 KDM3BQ7LBC6 1761 aa12.43□□□□□ -0.42
USP11-201ENST00000218348 UBR2Q8IWV8 1755 aa12.43□□□□□ -0.42
USP11-201ENST00000218348 NUCB1Q02818 461 aa12.43□□□□□ -0.42
USP11-201ENST00000218348 STK31Q9BXU1 1019 aa12.43□□□□□ -0.42
USP11-201ENST00000218348 PRDM11Q9NQV5 511 aa12.43□□□□□ -0.42
USP11-201ENST00000218348 ITGB4P16144 1822 aa12.43□□□□□ -0.42
USP11-201ENST00000218348 ONECUT3O60422 494 aaPredicted RBP12.43□□□□□ -0.42
USP11-201ENST00000218348 CARD10Q9BWT7 1032 aa12.43□□□□□ -0.42
USP11-201ENST00000218348 TSHZ3Q63HK5 1081 aa12.42□□□□□ -0.42
USP11-201ENST00000218348 ABCC4O15439 1325 aa12.42□□□□□ -0.42
USP11-201ENST00000218348 CICQ96RK0 1608 aaPredicted RBP12.42□□□□□ -0.42
USP11-201ENST00000218348 VPS72Q15906 364 aa12.42□□□□□ -0.42
USP11-201ENST00000218348 UNC5CLQ8IV45 518 aa12.42□□□□□ -0.42
USP11-201ENST00000218348 ZNF530Q6P9A1 599 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms