RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 SMARCC1Q92922 1105 aaPredicted RBP13.16□□□□□ -0.3
RGPD5-201ENST00000016946 USP5P45974 858 aa13.16□□□□□ -0.3
RGPD5-201ENST00000016946 CDC5LQ99459 802 aaKnown RBP13.16□□□□□ -0.3
RGPD5-201ENST00000016946 EPS15P42566 896 aa13.16□□□□□ -0.3
RGPD5-201ENST00000016946 MAP3K12Q12852 859 aa13.16□□□□□ -0.3
RGPD5-201ENST00000016946 CCDC70Q6NSX1 233 aa13.16□□□□□ -0.3
RGPD5-201ENST00000016946 PPIP5K1Q6PFW1 1433 aa13.15□□□□□ -0.3
RGPD5-201ENST00000016946 DDX46Q7L014 1031 aaKnown RBP13.15□□□□□ -0.3
RGPD5-201ENST00000016946 UGGT2Q9NYU1 1516 aa13.15□□□□□ -0.3
RGPD5-201ENST00000016946 WDHD1O75717 1129 aaPredicted RBP13.15□□□□□ -0.3
RGPD5-201ENST00000016946 WWC2Q6AWC2 1192 aa13.15□□□□□ -0.3
RGPD5-201ENST00000016946 CABLES1Q8TDN4 633 aa13.15□□□□□ -0.3
RGPD5-201ENST00000016946 POLR3DP05423 398 aaPredicted RBP13.15□□□□□ -0.3
RGPD5-201ENST00000016946 CT47A1Q5JQC4 288 aaPredicted RBP13.15□□□□□ -0.3
RGPD5-201ENST00000016946 GSE1Q14687 1217 aa13.15□□□□□ -0.3
RGPD5-201ENST00000016946 CWC25Q9NXE8 425 aaPredicted RBP13.15□□□□□ -0.3
RGPD5-201ENST00000016946 FBLN1P23142 703 aa13.14□□□□□ -0.31
RGPD5-201ENST00000016946 JAKMIP1Q96N16 626 aaKnown RBP13.14□□□□□ -0.31
RGPD5-201ENST00000016946 FAM83GA6ND36 823 aa13.14□□□□□ -0.31
RGPD5-201ENST00000016946 PTPRCP08575 1304 aa13.14□□□□□ -0.31
RGPD5-201ENST00000016946 AEBP1Q8IUX7 1158 aa13.14□□□□□ -0.31
RGPD5-201ENST00000016946 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
RGPD5-201ENST00000016946 LRRFIP2Q9Y608 721 aaKnown RBP13.14□□□□□ -0.31
RGPD5-201ENST00000016946 LMTK3Q96Q04 1460 aa13.14□□□□□ -0.31
RGPD5-201ENST00000016946 NUP160Q12769 1436 aa13.14□□□□□ -0.31
RGPD5-201ENST00000016946 SLF2Q8IX21 1173 aa13.14□□□□□ -0.31
RGPD5-201ENST00000016946 PDRG1Q9NUG6 133 aa13.14□□□□□ -0.31
RGPD5-201ENST00000016946 LDHAL6AQ6ZMR3 332 aa13.14□□□□□ -0.31
RGPD5-201ENST00000016946 ATP5J2-PTCD1G3V325 749 aa13.13□□□□□ -0.31
RGPD5-201ENST00000016946 IL2RBP14784 551 aa13.13□□□□□ -0.31
RGPD5-201ENST00000016946 NBPF6Q5VWK0 638 aa13.13□□□□□ -0.31
RGPD5-201ENST00000016946 NBPF5PQ86XG9 351 aaPredicted RBP13.13□□□□□ -0.31
RGPD5-201ENST00000016946 ZSCAN31Q96LW9 406 aaPredicted RBP13.13□□□□□ -0.31
RGPD5-201ENST00000016946 NBPF4Q96M43 638 aa13.13□□□□□ -0.31
RGPD5-201ENST00000016946 BOLA2Q9H3K6 86 aa13.13□□□□□ -0.31
RGPD5-201ENST00000016946 MAP3K2Q9Y2U5 619 aa13.13□□□□□ -0.31
RGPD5-201ENST00000016946 MBIPQ9NS73 344 aa13.13□□□□□ -0.31
RGPD5-201ENST00000016946 FIBPO43427 364 aa13.13□□□□□ -0.31
RGPD5-201ENST00000016946 MBD3O95983 291 aa13.13□□□□□ -0.31
RGPD5-201ENST00000016946 ACSBG1Q96GR2 724 aa13.13□□□□□ -0.31
RGPD5-201ENST00000016946 PI4KAP2A4QPH2 592 aa13.13□□□□□ -0.31
RGPD5-201ENST00000016946 PI4KAP1Q8N8J0 262 aa13.13□□□□□ -0.31
RGPD5-201ENST00000016946 ADAMTS12P58397 1594 aa13.12□□□□□ -0.31
RGPD5-201ENST00000016946 UBE3BQ7Z3V4 1068 aa13.12□□□□□ -0.31
RGPD5-201ENST00000016946 MKNK2Q9HBH9 465 aa13.12□□□□□ -0.31
RGPD5-201ENST00000016946 MPHOSPH10O00566 681 aaKnown RBP13.12□□□□□ -0.31
RGPD5-201ENST00000016946 PUS7Q96PZ0 661 aaKnown RBP13.12□□□□□ -0.31
RGPD5-201ENST00000016946 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
RGPD5-201ENST00000016946 CEBPZQ03701 1054 aaKnown RBP13.12□□□□□ -0.31
RGPD5-201ENST00000016946 ANKRD13DQ6ZTN6 518 aa13.12□□□□□ -0.31
RGPD5-201ENST00000016946 ZNF622Q969S3 477 aaKnown RBP eCLIP13.12□□□□□ -0.31
RGPD5-201ENST00000016946 NAPBQ9H115 298 aa13.12□□□□□ -0.31
RGPD5-201ENST00000016946 ATP6V1AP38606 617 aa13.12□□□□□ -0.31
RGPD5-201ENST00000016946 CCDC8Q9H0W5 538 aaPredicted RBP13.12□□□□□ -0.31
RGPD5-201ENST00000016946 PIK3R4Q99570 1358 aa13.12□□□□□ -0.31
RGPD5-201ENST00000016946 HOMER1Q86YM7 354 aa13.12□□□□□ -0.31
RGPD5-201ENST00000016946 PTPRKQ15262 1439 aa13.12□□□□□ -0.31
RGPD5-201ENST00000016946 PIP4K2AP48426 406 aaPredicted RBP13.11□□□□□ -0.31
RGPD5-201ENST00000016946 MINDY4BA8MYZ0 360 aa13.11□□□□□ -0.31
RGPD5-201ENST00000016946 GCP02774 474 aa13.11□□□□□ -0.31
RGPD5-201ENST00000016946 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
RGPD5-201ENST00000016946 LARP1BQ659C4 914 aaKnown RBP13.11□□□□□ -0.31
RGPD5-201ENST00000016946 LDHCP07864 332 aa13.11□□□□□ -0.31
RGPD5-201ENST00000016946 ST5P78524 1137 aa13.11□□□□□ -0.31
RGPD5-201ENST00000016946 WASF1Q92558 559 aa13.11□□□□□ -0.31
RGPD5-201ENST00000016946 IL16Q14005 1332 aa13.11□□□□□ -0.31
RGPD5-201ENST00000016946 KIAA0556O60303 1618 aa13.1□□□□□ -0.31
RGPD5-201ENST00000016946 NAP1L1P55209 391 aaKnown RBP13.1□□□□□ -0.31
RGPD5-201ENST00000016946 ODF2Q5BJF6 829 aa13.1□□□□□ -0.31
RGPD5-201ENST00000016946 FLT4P35916 1363 aa13.1□□□□□ -0.31
RGPD5-201ENST00000016946 UHRF1BP1Q6BDS2 1440 aa13.1□□□□□ -0.31
RGPD5-201ENST00000016946 ANXA1P04083 346 aa13.1□□□□□ -0.31
RGPD5-201ENST00000016946 WDR33Q9C0J8 1336 aaKnown RBP13.1□□□□□ -0.31
RGPD5-201ENST00000016946 SMARCA5O60264 1052 aaPredicted RBP13.1□□□□□ -0.31
RGPD5-201ENST00000016946 ZNF76P36508 570 aa13.1□□□□□ -0.31
RGPD5-201ENST00000016946 ZNF592Q92610 1267 aa13.1□□□□□ -0.31
RGPD5-201ENST00000016946 EIF4A2Q14240 407 aaKnown RBP13.09□□□□□ -0.31
RGPD5-201ENST00000016946 NKTRP30414 1462 aaKnown RBP13.09□□□□□ -0.31
RGPD5-201ENST00000016946 ME1P48163 572 aa13.09□□□□□ -0.31
RGPD5-201ENST00000016946 SLC39A6Q13433 755 aa13.09□□□□□ -0.31
RGPD5-201ENST00000016946 TTLL12Q14166 644 aaPredicted RBP13.09□□□□□ -0.31
RGPD5-201ENST00000016946 TRIM27P14373 513 aa13.08□□□□□ -0.31
RGPD5-201ENST00000016946 ZHX3Q9H4I2 956 aa13.08□□□□□ -0.31
RGPD5-201ENST00000016946 K7ELQ4 463 aaPredicted RBP13.08□□□□□ -0.32
RGPD5-201ENST00000016946 KRT85P78386 507 aa13.08□□□□□ -0.32
RGPD5-201ENST00000016946 CCDC152Q4G0S7 254 aa13.08□□□□□ -0.32
RGPD5-201ENST00000016946 SETDB2Q96T68 719 aa13.08□□□□□ -0.32
RGPD5-201ENST00000016946 FAM13BQ9NYF5 915 aa13.08□□□□□ -0.32
RGPD5-201ENST00000016946 LETM1O95202 739 aaPredicted RBP13.08□□□□□ -0.32
RGPD5-201ENST00000016946 BMP2KQ9NSY1 1161 aaPredicted RBP13.08□□□□□ -0.32
RGPD5-201ENST00000016946 PRPF40AO75400 957 aaKnown RBP13.08□□□□□ -0.32
RGPD5-201ENST00000016946 MAGEC2Q9UBF1 373 aaPredicted RBP13.08□□□□□ -0.32
RGPD5-201ENST00000016946 PRPF40BQ6NWY9 871 aaKnown RBP13.08□□□□□ -0.32
RGPD5-201ENST00000016946 ARID3AQ99856 593 aa13.08□□□□□ -0.32
RGPD5-201ENST00000016946 POLKQ9UBT6 870 aa13.08□□□□□ -0.32
RGPD5-201ENST00000016946 ZRANB1Q9UGI0 708 aa13.08□□□□□ -0.32
RGPD5-201ENST00000016946 ZNF444Q8N0Y2 327 aaPredicted RBP13.07□□□□□ -0.32
RGPD5-201ENST00000016946 KRI1Q8N9T8 703 aaKnown RBP13.07□□□□□ -0.32
RGPD5-201ENST00000016946 PIBF1Q8WXW3 757 aa13.07□□□□□ -0.32
RGPD5-201ENST00000016946 RNF41Q9H4P4 317 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms