Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Cldn9Q9Z0S7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Cldn9Q9Z0S7 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Prob1-201ENSMUST00000097619 3021 ntBASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cldn9Q9Z0S7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cldn9Q9Z0S7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cldn9Q9Z0S7 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.33■□□□□ 0.05
Cldn9Q9Z0S7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cldn9Q9Z0S7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Cldn9Q9Z0S7 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Cldn9Q9Z0S7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cldn9Q9Z0S7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Mir6404-201ENSMUST00000183699 94 ntBASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cldn9Q9Z0S7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cldn9Q9Z0S7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cldn9Q9Z0S7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms