Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Col13a1Q9R1N9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col13a1Q9R1N9 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col13a1Q9R1N9 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col13a1Q9R1N9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Col13a1Q9R1N9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col13a1Q9R1N9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col13a1Q9R1N9 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col13a1Q9R1N9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col13a1Q9R1N9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col13a1Q9R1N9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.52□□□□□ -0.24
Col13a1Q9R1N9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.52□□□□□ -0.24
Col13a1Q9R1N9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Col13a1Q9R1N9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col13a1Q9R1N9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Col13a1Q9R1N9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Tfap2a-209ENSMUST00000225180 1828 ntBASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Col13a1Q9R1N9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 AC139382.1-201ENSMUST00000221402 498 ntBASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Col13a1Q9R1N9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Col13a1Q9R1N9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms