Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Chmp2aQ9DB34 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Gm27867-201ENSMUST00000184778 125 ntBASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Chmp2aQ9DB34 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Gm12895-201ENSMUST00000122214 226 ntBASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Rprl3-201ENSMUST00000157400 290 ntBASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Chmp2aQ9DB34 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.6■□□□□ 0.25
Chmp2aQ9DB34 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Chmp2aQ9DB34 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms