Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps33aQ9D2N9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps33aQ9D2N9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps33aQ9D2N9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Vps33aQ9D2N9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps33aQ9D2N9 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps33aQ9D2N9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Vps33aQ9D2N9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps33aQ9D2N9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Vps33aQ9D2N9 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Vps33aQ9D2N9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Vps33aQ9D2N9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.93■□□□□ 0.3
Vps33aQ9D2N9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Gm10710-201ENSMUST00000047876 3971 ntBASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Efs-202ENSMUST00000227037 2540 ntBASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps33aQ9D2N9 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Gm13148-201ENSMUST00000118892 745 ntBASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Actl10-202ENSMUST00000226583 1501 ntBASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.91■□□□□ 0.3
Vps33aQ9D2N9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Vps33aQ9D2N9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms