Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Upk1aQ9D132 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.12■□□□□ 0.01
Upk1aQ9D132 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1aQ9D132 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.12■□□□□ 0.01
Upk1aQ9D132 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.12■□□□□ 0.01
Upk1aQ9D132 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Gm5417-201ENSMUST00000079706 384 ntBASIC15.12■□□□□ 0.01
Upk1aQ9D132 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Upk1aQ9D132 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC15.11■□□□□ 0.01
Upk1aQ9D132 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Upk1aQ9D132 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.1■□□□□ 0.01
Upk1aQ9D132 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.1■□□□□ 0.01
Upk1aQ9D132 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.1■□□□□ 0.01
Upk1aQ9D132 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.1■□□□□ 0.01
Upk1aQ9D132 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Gm11336-201ENSMUST00000118168 334 ntBASIC15.1■□□□□ 0.01
Upk1aQ9D132 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Upk1aQ9D132 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Upk1aQ9D132 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Upk1aQ9D132 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Upk1aQ9D132 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Upk1aQ9D132 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.09■□□□□ 0.01
Upk1aQ9D132 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Upk1aQ9D132 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Upk1aQ9D132 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms