Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx47Q9CWX9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.45■□□□□ 0.22
Ddx47Q9CWX9 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ddx47Q9CWX9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ddx47Q9CWX9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ddx47Q9CWX9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ddx47Q9CWX9 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx47Q9CWX9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx47Q9CWX9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx47Q9CWX9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.41■□□□□ 0.22
Ddx47Q9CWX9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx47Q9CWX9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx47Q9CWX9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx47Q9CWX9 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx47Q9CWX9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx47Q9CWX9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx47Q9CWX9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx47Q9CWX9 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ddx47Q9CWX9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.41■□□□□ 0.22
Ddx47Q9CWX9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Ddx47Q9CWX9 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms