Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC8.56□□□□□ -1.04
Sec61bQ9CQS8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Gm8097-201ENSMUST00000117903 829 ntBASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Gm4459-201ENSMUST00000118750 468 ntBASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Gm13418-201ENSMUST00000119097 944 ntBASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Gm5364-201ENSMUST00000216789 889 ntBASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 AC154527.4-201ENSMUST00000224364 1667 ntBASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC8.55□□□□□ -1.04
Sec61bQ9CQS8 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Gm32996-201ENSMUST00000199828 1447 ntBASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Gm25406-201ENSMUST00000157599 105 ntBASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Gm6550-201ENSMUST00000187574 993 ntBASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Gm37584-201ENSMUST00000193595 1290 ntBASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC8.54□□□□□ -1.04
Sec61bQ9CQS8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sec61bQ9CQS8 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Sec61bQ9CQS8 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms