Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl54Q9CPW3 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl54Q9CPW3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl54Q9CPW3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl54Q9CPW3 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl54Q9CPW3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl54Q9CPW3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Mrpl54Q9CPW3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl54Q9CPW3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl54Q9CPW3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Mrpl54Q9CPW3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl54Q9CPW3 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl54Q9CPW3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Mrpl54Q9CPW3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Gm4968-201ENSMUST00000071458 858 ntBASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Mrpl54Q9CPW3 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Gm18958-201ENSMUST00000174258 762 ntBASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Mrpl54Q9CPW3 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Gm42545-201ENSMUST00000202755 922 ntBASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Mrpl54Q9CPW3 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms