Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rfc4Q99J62 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.32■□□□□ 0.52
Rfc4Q99J62 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rfc4Q99J62 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rfc4Q99J62 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Gm11025-201ENSMUST00000140773 466 ntBASIC18.29■□□□□ 0.52
Rfc4Q99J62 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Gm27300-201ENSMUST00000184085 97 ntBASIC18.29■□□□□ 0.52
Rfc4Q99J62 Gm27335-201ENSMUST00000184758 97 ntBASIC18.29■□□□□ 0.52
Rfc4Q99J62 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Rfc4Q99J62 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Rfc4Q99J62 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Gm8344-201ENSMUST00000119813 856 ntBASIC18.28■□□□□ 0.52
Rfc4Q99J62 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Gm4899-201ENSMUST00000178708 719 ntBASIC18.28■□□□□ 0.52
Rfc4Q99J62 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc4Q99J62 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.28■□□□□ 0.52
Rfc4Q99J62 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rfc4Q99J62 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.27■□□□□ 0.52
Rfc4Q99J62 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc4Q99J62 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc4Q99J62 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rfc4Q99J62 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc4Q99J62 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Rfc4Q99J62 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc4Q99J62 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc4Q99J62 Gm14701-201ENSMUST00000117156 348 ntBASIC18.27■□□□□ 0.52
Rfc4Q99J62 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc4Q99J62 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc4Q99J62 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc4Q99J62 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc4Q99J62 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Rfc4Q99J62 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.27■□□□□ 0.52
Rfc4Q99J62 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Rfc4Q99J62 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfc4Q99J62 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rfc4Q99J62 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfc4Q99J62 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfc4Q99J62 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rfc4Q99J62 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Rfc4Q99J62 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfc4Q99J62 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfc4Q99J62 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms