Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Gm11779-201ENSMUST00000118541 368 ntBASIC18.76■□□□□ 0.59
Col20a1Q923P0 Gm15358-201ENSMUST00000119249 520 ntBASIC18.76■□□□□ 0.59
Col20a1Q923P0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Gm19164-201ENSMUST00000210667 640 ntBASIC18.76■□□□□ 0.59
Col20a1Q923P0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC18.76■□□□□ 0.59
Col20a1Q923P0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.76■□□□□ 0.59
Col20a1Q923P0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Col20a1Q923P0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.75■□□□□ 0.59
Col20a1Q923P0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Col20a1Q923P0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.74■□□□□ 0.59
Col20a1Q923P0 AC132104.2-201ENSMUST00000215011 266 ntBASIC18.74■□□□□ 0.59
Col20a1Q923P0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.74■□□□□ 0.59
Col20a1Q923P0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Gm37153-201ENSMUST00000193637 231 ntBASIC18.74■□□□□ 0.59
Col20a1Q923P0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.74■□□□□ 0.59
Col20a1Q923P0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.74■□□□□ 0.59
Col20a1Q923P0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms