Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Vps39Q8R5L3 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.99■□□□□ 0.15
Vps39Q8R5L3 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps39Q8R5L3 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Prob1-201ENSMUST00000097619 3021 ntBASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Gm9013-201ENSMUST00000132939 882 ntBASIC15.97■□□□□ 0.15
Vps39Q8R5L3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps39Q8R5L3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Gm9987-201ENSMUST00000069768 567 ntBASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps39Q8R5L3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.96■□□□□ 0.14
Vps39Q8R5L3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vps39Q8R5L3 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vps39Q8R5L3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vps39Q8R5L3 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.96■□□□□ 0.14
Vps39Q8R5L3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps39Q8R5L3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms