Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Cdt1Q8R4E9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.41■□□□□ 0.06
Cdt1Q8R4E9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Cdt1Q8R4E9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Cdt1Q8R4E9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.06
Cdt1Q8R4E9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Gm1401-201ENSMUST00000122048 772 ntBASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Cdt1Q8R4E9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms