Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShfQ8CG80 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ShfQ8CG80 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShfQ8CG80 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.23□□□□□ -0.13
ShfQ8CG80 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
ShfQ8CG80 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
ShfQ8CG80 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
ShfQ8CG80 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ShfQ8CG80 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.22□□□□□ -0.13
ShfQ8CG80 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.22□□□□□ -0.13
ShfQ8CG80 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Gm11355-201ENSMUST00000121120 306 ntBASIC14.22□□□□□ -0.13
ShfQ8CG80 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.22□□□□□ -0.13
ShfQ8CG80 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
ShfQ8CG80 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.22□□□□□ -0.13
ShfQ8CG80 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
ShfQ8CG80 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ShfQ8CG80 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.22□□□□□ -0.13
ShfQ8CG80 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
ShfQ8CG80 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
ShfQ8CG80 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.21□□□□□ -0.13
ShfQ8CG80 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ShfQ8CG80 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC14.21□□□□□ -0.13
ShfQ8CG80 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Gm43799-201ENSMUST00000201845 579 ntBASIC14.21□□□□□ -0.13
ShfQ8CG80 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.21□□□□□ -0.13
ShfQ8CG80 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ShfQ8CG80 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.21□□□□□ -0.13
ShfQ8CG80 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ShfQ8CG80 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.21□□□□□ -0.14
ShfQ8CG80 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ShfQ8CG80 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ShfQ8CG80 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ShfQ8CG80 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
ShfQ8CG80 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.2□□□□□ -0.14
ShfQ8CG80 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
ShfQ8CG80 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ShfQ8CG80 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.2□□□□□ -0.14
ShfQ8CG80 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.2□□□□□ -0.14
ShfQ8CG80 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.2□□□□□ -0.14
ShfQ8CG80 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ShfQ8CG80 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ShfQ8CG80 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.19□□□□□ -0.14
ShfQ8CG80 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
ShfQ8CG80 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms