Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Lysmd4Q8CC84 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Gm715-201ENSMUST00000117865 831 ntBASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Gm11336-201ENSMUST00000118168 334 ntBASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Gm27463-201ENSMUST00000183569 57 ntBASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Arhgef33-211ENSMUST00000225658 473 ntBASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Gm10812-201ENSMUST00000099864 546 ntBASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Lysmd4Q8CC84 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Lysmd4Q8CC84 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.28□□□□□ -0.12
Lysmd4Q8CC84 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms