Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ccdc40Q8BI79 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Ccdc40Q8BI79 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
Ccdc40Q8BI79 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Gm45546-201ENSMUST00000211053 2394 ntBASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ccdc40Q8BI79 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Gm9013-201ENSMUST00000132939 882 ntBASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ccdc40Q8BI79 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ccdc40Q8BI79 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ccdc40Q8BI79 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms