Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Depdc1bQ8BH88 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Depdc1bQ8BH88 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Depdc1bQ8BH88 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Depdc1bQ8BH88 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Depdc1bQ8BH88 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Depdc1bQ8BH88 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Depdc1bQ8BH88 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Depdc1bQ8BH88 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Depdc1bQ8BH88 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Depdc1bQ8BH88 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Olfr129-201ENSMUST00000122318 993 ntBASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Depdc1bQ8BH88 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Gm15794-201ENSMUST00000120182 631 ntBASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Depdc1bQ8BH88 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Depdc1bQ8BH88 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Depdc1bQ8BH88 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Depdc1bQ8BH88 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms