Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Trim6Q8BGE7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Trim6Q8BGE7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Gm29257-201ENSMUST00000186115 639 ntBASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Trim6Q8BGE7 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.92■□□□□ 0.3
Trim6Q8BGE7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Gm44450-201ENSMUST00000199528 114 ntBASIC16.92■□□□□ 0.3
Trim6Q8BGE7 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trim6Q8BGE7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trim6Q8BGE7 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms