Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim45Q6PFY8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim45Q6PFY8 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.11■□□□□ 0.01
Trim45Q6PFY8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim45Q6PFY8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trim45Q6PFY8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms