Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf220Q6PDX6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf220Q6PDX6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Gm42545-201ENSMUST00000202755 922 ntBASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Gm20049-201ENSMUST00000219950 730 ntBASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rnf220Q6PDX6 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Gm18666-201ENSMUST00000190039 958 ntBASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Gm4974-201ENSMUST00000209974 875 ntBASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rnf220Q6PDX6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms