Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Zfp248Q640N4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Zfp248Q640N4 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Zfp248Q640N4 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.14□□□□□ -0.47
Zfp248Q640N4 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.14□□□□□ -0.47
Zfp248Q640N4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Gm11355-201ENSMUST00000121120 306 ntBASIC12.14□□□□□ -0.47
Zfp248Q640N4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Mir6982-201ENSMUST00000184354 68 ntBASIC12.14□□□□□ -0.47
Zfp248Q640N4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.14□□□□□ -0.47
Zfp248Q640N4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.14□□□□□ -0.47
Zfp248Q640N4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.13□□□□□ -0.47
Zfp248Q640N4 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Zfp248Q640N4 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp248Q640N4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp248Q640N4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp248Q640N4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp248Q640N4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp248Q640N4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp248Q640N4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp248Q640N4 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp248Q640N4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Zfp248Q640N4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms