Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC20.66■□□□□ 0.9
Ccne1Q61457 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccne1Q61457 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccne1Q61457 Gm19164-201ENSMUST00000210667 640 ntBASIC20.66■□□□□ 0.9
Ccne1Q61457 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ccne1Q61457 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccne1Q61457 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccne1Q61457 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccne1Q61457 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Ccne1Q61457 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccne1Q61457 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccne1Q61457 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ccne1Q61457 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ccne1Q61457 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Ccne1Q61457 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne1Q61457 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne1Q61457 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne1Q61457 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne1Q61457 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne1Q61457 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Ccne1Q61457 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC20.65■□□□□ 0.9
Ccne1Q61457 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne1Q61457 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne1Q61457 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne1Q61457 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Ccne1Q61457 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.65■□□□□ 0.9
Ccne1Q61457 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne1Q61457 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Ccne1Q61457 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne1Q61457 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne1Q61457 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ccne1Q61457 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne1Q61457 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne1Q61457 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ccne1Q61457 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccne1Q61457 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ccne1Q61457 Gm38318-201ENSMUST00000195769 1706 ntBASIC20.64■□□□□ 0.9
Ccne1Q61457 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.64■□□□□ 0.9
Ccne1Q61457 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC20.64■□□□□ 0.89
Ccne1Q61457 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC20.64■□□□□ 0.89
Ccne1Q61457 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ccne1Q61457 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ccne1Q61457 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ccne1Q61457 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Gm7292-201ENSMUST00000194706 2527 ntBASIC20.63■□□□□ 0.89
Ccne1Q61457 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Gm18489-201ENSMUST00000172565 551 ntBASIC20.63■□□□□ 0.89
Ccne1Q61457 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccne1Q61457 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC20.63■□□□□ 0.89
Ccne1Q61457 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.63■□□□□ 0.89
Ccne1Q61457 Gm7787-201ENSMUST00000216858 688 ntBASIC20.63■□□□□ 0.89
Ccne1Q61457 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.63■□□□□ 0.89
Ccne1Q61457 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ccne1Q61457 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ccne1Q61457 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ccne1Q61457 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ccne1Q61457 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccne1Q61457 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne1Q61457 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne1Q61457 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ccne1Q61457 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne1Q61457 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne1Q61457 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccne1Q61457 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne1Q61457 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Ccne1Q61457 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne1Q61457 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC20.62■□□□□ 0.89
Ccne1Q61457 Gm44492-201ENSMUST00000197012 141 ntBASIC20.62■□□□□ 0.89
Ccne1Q61457 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.62■□□□□ 0.89
Ccne1Q61457 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne1Q61457 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccne1Q61457 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ccne1Q61457 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms