Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a4Q60857 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a4Q60857 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Gm27646-201ENSMUST00000183989 110 ntBASIC16.28■□□□□ 0.2
Slc6a4Q60857 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.28■□□□□ 0.2
Slc6a4Q60857 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Slc6a4Q60857 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a4Q60857 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.27■□□□□ 0.2
Slc6a4Q60857 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.27■□□□□ 0.2
Slc6a4Q60857 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Gm6550-201ENSMUST00000187574 993 ntBASIC16.27■□□□□ 0.2
Slc6a4Q60857 Gm43514-201ENSMUST00000198852 424 ntBASIC16.27■□□□□ 0.2
Slc6a4Q60857 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
Slc6a4Q60857 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Slc6a4Q60857 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a4Q60857 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a4Q60857 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a4Q60857 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a4Q60857 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a4Q60857 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a4Q60857 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a4Q60857 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Slc6a4Q60857 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.26■□□□□ 0.19
Slc6a4Q60857 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Gm6257-201ENSMUST00000163864 910 ntBASIC16.26■□□□□ 0.19
Slc6a4Q60857 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Slc6a4Q60857 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a4Q60857 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.25■□□□□ 0.19
Slc6a4Q60857 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.25■□□□□ 0.19
Slc6a4Q60857 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Gm27525-201ENSMUST00000184465 107 ntBASIC16.25■□□□□ 0.19
Slc6a4Q60857 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Gm18206-201ENSMUST00000207027 926 ntBASIC16.25■□□□□ 0.19
Slc6a4Q60857 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a4Q60857 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Gm15590-201ENSMUST00000078419 552 ntBASIC16.25■□□□□ 0.19
Slc6a4Q60857 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Slc6a4Q60857 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms