Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Gm7506-201ENSMUST00000207758 815 ntBASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav2Q5R1I9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav2Q5R1I9 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav2Q5R1I9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trav2Q5R1I9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav2Q5R1I9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav2Q5R1I9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav2Q5R1I9 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Gm6296-201ENSMUST00000222599 943 ntBASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav2Q5R1I9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Gm4459-201ENSMUST00000118750 468 ntBASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Gm7862-201ENSMUST00000121461 292 ntBASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Gm4535-201ENSMUST00000182274 558 ntBASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.69□□□□□ -0.38
Trav2Q5R1I9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.69□□□□□ -0.38
Trav2Q5R1I9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Gm10355-201ENSMUST00000097146 517 ntBASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav2Q5R1I9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav2Q5R1I9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms