Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.16■□□□□ 0.02
Khdc4Q3TCX3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Khdc4Q3TCX3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Gm15165-201ENSMUST00000118140 502 ntBASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Gm44430-201ENSMUST00000203376 995 ntBASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Gm6376-201ENSMUST00000209407 580 ntBASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Gm5867-201ENSMUST00000063197 592 ntBASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Rps4l-201ENSMUST00000071745 943 ntBASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Khdc4Q3TCX3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Gm44454-201ENSMUST00000198541 138 ntBASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Khdc4Q3TCX3 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 AC161829.1-201ENSMUST00000220298 281 ntBASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC15.12■□□□□ 0.01
Khdc4Q3TCX3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms