Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Nhej1Q3KNJ2 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 AL672049.1-201ENSMUST00000197943 91 ntBASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17■□□□□ 0.31
Nhej1Q3KNJ2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Gm45058-201ENSMUST00000205810 766 ntBASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Nhej1Q3KNJ2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Nhej1Q3KNJ2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nhej1Q3KNJ2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nhej1Q3KNJ2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Nhej1Q3KNJ2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Nhej1Q3KNJ2 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nhej1Q3KNJ2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Nhej1Q3KNJ2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Nhej1Q3KNJ2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.97■□□□□ 0.31
Nhej1Q3KNJ2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms