Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col19a1Q0VF58 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col19a1Q0VF58 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col19a1Q0VF58 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col19a1Q0VF58 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col19a1Q0VF58 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col19a1Q0VF58 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col19a1Q0VF58 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Gm18187-201ENSMUST00000196476 984 ntBASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Gm19164-201ENSMUST00000210667 640 ntBASIC16.91■□□□□ 0.3
Col19a1Q0VF58 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Col19a1Q0VF58 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Gm6415-201ENSMUST00000118488 348 ntBASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Gm9794-201ENSMUST00000202370 423 ntBASIC16.9■□□□□ 0.3
Col19a1Q0VF58 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.9■□□□□ 0.3
Col19a1Q0VF58 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Col19a1Q0VF58 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Gm7730-201ENSMUST00000212486 454 ntBASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
Col19a1Q0VF58 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Gm7488-201ENSMUST00000117148 684 ntBASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Gm12008-201ENSMUST00000117791 755 ntBASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col19a1Q0VF58 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms