Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd3P97770 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd3P97770 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd3P97770 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd3P97770 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Thumpd3P97770 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Thumpd3P97770 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.25■□□□□ 0.19
Thumpd3P97770 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.25■□□□□ 0.19
Thumpd3P97770 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.25■□□□□ 0.19
Thumpd3P97770 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Thumpd3P97770 Mir1668-201ENSMUST00000184114 107 ntBASIC16.25■□□□□ 0.19
Thumpd3P97770 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Thumpd3P97770 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Thumpd3P97770 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.25■□□□□ 0.19
Thumpd3P97770 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.25■□□□□ 0.19
Thumpd3P97770 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.25■□□□□ 0.19
Thumpd3P97770 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Thumpd3P97770 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Thumpd3P97770 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Thumpd3P97770 Actl10-202ENSMUST00000226583 1501 ntBASIC16.24■□□□□ 0.19
Thumpd3P97770 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Thumpd3P97770 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.24■□□□□ 0.19
Thumpd3P97770 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.24■□□□□ 0.19
Thumpd3P97770 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Thumpd3P97770 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Thumpd3P97770 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.24■□□□□ 0.19
Thumpd3P97770 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Thumpd3P97770 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.24■□□□□ 0.19
Thumpd3P97770 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Thumpd3P97770 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.23■□□□□ 0.19
Thumpd3P97770 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.23■□□□□ 0.19
Thumpd3P97770 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC16.23■□□□□ 0.19
Thumpd3P97770 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Thumpd3P97770 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Thumpd3P97770 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Thumpd3P97770 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.23■□□□□ 0.19
Thumpd3P97770 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.23■□□□□ 0.19
Thumpd3P97770 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Thumpd3P97770 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Thumpd3P97770 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Thumpd3P97770 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Thumpd3P97770 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms