Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Nkx2-3P97334 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nkx2-3P97334 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Nkx2-3P97334 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-3P97334 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nkx2-3P97334 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-3P97334 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-3P97334 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-3P97334 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-3P97334 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-3P97334 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-3P97334 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-3P97334 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-3P97334 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.96■□□□□ 0.79
Nkx2-3P97334 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.96■□□□□ 0.79
Nkx2-3P97334 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-3P97334 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
Nkx2-3P97334 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-3P97334 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Nkx2-3P97334 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nkx2-3P97334 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Nkx2-3P97334 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
Nkx2-3P97334 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-3P97334 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-3P97334 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC19.95■□□□□ 0.78
Nkx2-3P97334 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-3P97334 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.95■□□□□ 0.78
Nkx2-3P97334 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-3P97334 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-3P97334 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-3P97334 Gm5184-201ENSMUST00000220417 1702 ntBASIC19.95■□□□□ 0.78
Nkx2-3P97334 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-3P97334 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-3P97334 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.95■□□□□ 0.78
Nkx2-3P97334 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-3P97334 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nkx2-3P97334 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC19.94■□□□□ 0.78
Nkx2-3P97334 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.94■□□□□ 0.78
Nkx2-3P97334 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nkx2-3P97334 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.94■□□□□ 0.78
Nkx2-3P97334 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.93■□□□□ 0.78
Nkx2-3P97334 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nkx2-3P97334 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nkx2-3P97334 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms